Arachis hypogaea (peanut): 112695162
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Entry
112695162 CDS
T07294
Name
(RefSeq) pre-mRNA-processing factor 39-1 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
ahf
Arachis hypogaea (peanut)
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112695162
Spliceosome [BR:
ahf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112695162
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_MalT
NRDE-2
TPR_12
TPR_16
TPR_11
TPR_10
Motif
Other DBs
NCBI-GeneID:
112695162
NCBI-ProteinID:
XP_025603181
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Position
6:complement(883979..892184)
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AA seq
821 aa
AA seq
DB search
MGDSETVVAEAPAAETHAAAGFGDSASNPTQEAASTVAEPAAEAATQANSAYALGYSNTG
DGNAYAGDPNAMQPEAQTNSMEDSKQGTEAPSGLGSAATGSSQVNGGPVGAIANATGLEN
GNALGNTDGSADEKQLADGYAAMSAEEDRLWNIIRANSSDFTAWTSLIEETEKVAEDNIL
KIRRVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEVYERAVQGVTYSVDMWLHYCIF
AISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLANIYTRILENPN
QQLDRYFNSFKELAANRPLSELQTADEAAVVAGAASEAADQTVEREVRPDGAENSPKPVS
AGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLD
FIEREGDLSKIVKLYERCVIACANYPEYWIRYILCMEASGSMDLANNVLARATQVFVKRQ
PEIHLFSARFKEQSGDIAGARAAYQLVHTEISPGLLEAIIKHANMEHRLGKLEDAFSLYE
QAIAIEKGKEHSQTLPMLFAQFSRFVYLASGNAEKARQILVEGVENVMMSKPLLEALLHF
EAIQPPPKRVDMNYLESLVVKFIMPNPESPGVVSAAEREELSSIFLEFLNLFGDVQSIKR
CEDRHAKLFLPHRSMSELKKRHAEDFLASDKAKMARSYSVPSAAQSAVGAYPNAQNQWAN
YGVQPQAWPPATQAQQWPAGYTQPASYGAYAGYGANYPNSQVPASVPQNTAYGAYPAAYP
VQPAVPQQSYAQPAAAVAPAAAVAPAQQPAAVPQAYYGSYY
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggagatagtgaaacagtagttgccgaagcacctgcagctgagacacatgctgctgct
gggtttggtgactctgcctcaaaccctactcaggaagcagcttctactgttgctgagcct
gctgcagaggctgctactcaagccaattcagcttatgccttaggttattcgaatactggc
gacgggaatgcttatgctggggatcctaatgctatgcaaccagaagcccaaaccaattca
atggaggattccaagcaaggtactgaagctccaagtgggcttggaagtgcagctacaggc
tcaagtcaagtaaatggtggtccagtgggtgcaatagcaaatgcaacaggacttgaaaat
gggaatgcattagggaacactgatggatcggctgatgagaaacagcttgcggatggttat
gctgccatgtctgctgaagaagatcgactgtggaatattataagagctaattcttcagat
tttacggcttggacttccttgatcgaagagacagagaaggtggccgaggataacattctg
aagattcgaagagtttatgatgcttttctagctgagtttcccttatgttatggttattgg
aagaaatatgctgatcatgaggcacggcttggctctgtcgataaagttgttgaagtttat
gaacgtgctgttcaaggtgttacctattcagtggacatgtggttgcattattgcatattt
gctataagcacgtatggggatccagacactgtgcgtaggctttttgaacgaggattagct
tatgttggaacagattatctttcttttcctctttgggacaagtacattgaatatgagtac
atgcagcaagactgggctcgtcttgccaatatctacactagaatattagagaatccaaat
cagcaactggatcgatatttcaacagcttcaaggagttagctgcaaatcgacctctttca
gagctacaaactgctgatgaagctgctgtagtggcaggtgctgcttcagaggctgctgac
caaactgttgagagagaggttcgtcctgatggtgcagaaaattctcctaaacctgtaagt
gctggattaacagaagcagaagagttggagaagtatatcgccattagagaagagatgtat
aagaaagctaaagagttcgattctaagatcattggttttgaaacagctatcaggaggcca
tactttcatgtacggccactcaatgttggagagcttgaaaattggcataattatctggat
tttatagagagggaaggtgacttaagcaagattgtcaagttatatgagaggtgtgtcatt
gcatgtgccaattaccctgagtactggatacgctatattttgtgtatggaagccagtgga
agtatggatcttgcaaataatgtgcttgctcgggcaacccaagtctttgtcaagaggcaa
cctgaaatacatcttttttctgctcggtttaaggagcagtctggagatatagctggtgct
agagctgcctatcaacttgttcatactgaaatttctcctggtcttcttgaagcgataatc
aagcatgcgaatatggaacatcgactgggaaagttggaggatgccttctctttgtatgaa
caagccattgccattgaaaagggaaaagaacattcccaaacattgccgatgctgtttgct
caattttctcgattcgtctatttggcttctgggaatgcagaaaaggcaagacagattcta
gttgaaggggttgagaatgttatgatgtcgaaaccgctacttgaggctttattgcatttt
gaggctattcagcccccaccaaagcgagttgatatgaactatttggagtcattggtagtc
aaatttataatgcctaaccctgagagtcctggtgttgtaagtgcagctgagcgggaggaa
ctttctagcatttttttggagtttttgaatctctttggagatgtccaatctatcaagagg
tgtgaggataggcatgccaaattgttcttgccacacaggagcatgtcagagttaaaaaaa
cgtcatgctgaggactttttagcttcagataaagcaaaaatggcaagatcttattctgtt
ccatcagctgcccaatctgcagtgggtgcatatccaaatgcacagaatcagtgggctaat
tatggtgtacaacctcaagcttggccaccagccacacaggcacaacagtggcctgctggc
tacactcagccggcttcatatggggcttatgctggatatggagctaactatccaaattct
caggtgcctgcatcagttccacaaaatactgcttatggagcctatccagcagcatatccg
gtacagccggctgttccccagcaaagttatgcacaacctgcagcagctgtggctcctgca
gcggctgtggctcctgcacagcaacctgctgcagttcctcaagcctattacgggagttat
tactga
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