Arachis hypogaea (peanut): 112695717
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Entry
112695717 CDS
T07294
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112695717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112695717
03009 Ribosome biogenesis [BR:
ahf03009
]
112695717
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112695717
Spliceosome [BR:
ahf03041
]
Complex A
U2 snRNP components
U2 related factors
112695717
Complex B
112695717
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
112695717
Ribosome biogenesis [BR:
ahf03009
]
Eukaryotic type
90S particles
Helicases
112695717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
FtsK_SpoIIIE
ABC_tran
ResIII
SRP54
AAA_7
Flavi_DEAD
T2SSE
AAA_30
PhoH
AAA_16
AAA_33
Motif
Other DBs
NCBI-GeneID:
112695717
NCBI-ProteinID:
XP_025603957
LinkDB
All DBs
Position
Arahy.06:complement(7363462..7367430)
Genome browser
AA seq
701 aa
AA seq
DB search
MSESGGGATNNNHLINRWTGRPFSQRYFEILEKRKSLPVWQQKHQFLRTLAHNQILILVG
ETGSGKTTQIPQFVLNAVDLETPDKCRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEV
GYSIRFEDCSSSRTVLKYLTDGMLLREAMTDPLLEQYKVIILDEAHERTLATDVLFGLIK
EVLKNRHDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIR
TVMQIHMGEPSGDILVFLTGEEEIEDACRKISKEISNLGDQVGPVKVVSLYSTLPPAMQQ
KIFEPPPPPLKEGGPPGRKIIVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRVRVESLL
VSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANSVLTLKKL
GIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGTLTKLGEIMSEFPLDPQMSKMLIV
SPEFNCSNEILSMCAMLSAPNCFVRPREVQKAADEAKARFGHIDGDHLTLLNVYHAYKQN
NEDPSWCYDNFVNQRALKSADNVRQQLVRIMARFSLKLCSTDFNSRDYYINIRKAMLAGY
FMQVAHLGRTGHYLTVKDNQVVHLHPSTCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGGW
LVDIAPHYYDLSNFPHCEAKGVLERLYKKKKKGKEEARKHK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatccggcggcggagccaccaacaacaaccacctcatcaatcggtggaccggg
aggcctttttcgcagaggtactttgagattctggagaagaggaagagtcttcccgtttgg
cagcagaaacaccagttcttgcgaactctcgcccataaccagattctcattctcgtcggt
gaaactggcagtggcaaaaccacgcagattcctcaatttgttttgaatgctgttgattta
gaaacaccagataaatgcaggaagatgatgattgcgtgcactcagcctcggagagtggct
gcaatgtctgtttcccggcgtgtggctgaagagatggatgtaacgattggagaagaggtt
ggttatagtatcagatttgaagactgcagcagttcaaggacagttttgaagtatctcaca
gatggtatgcttttaagagaagcaatgacagatccactcttggaacaatataaagtaatt
attctcgatgaggcacatgaaaggactttggctacagatgtgctatttggccttataaag
gaagttcttaaaaatagacatgacttaaagttagtcgtaatgagtgcgactctagaagct
gaaaagttccagggctactttagtggtgcccctcttatgaaagttccaggaaggctgcat
cctgttgaaattttttatactcaggaacctgaaagagattacctggaggctgctattagg
acggtgatgcagatacacatgggcgaaccttctggggatatacttgtttttctaacggga
gaggaagagatagaagatgcatgccgcaaaatatctaaagaaatttcaaatttgggagat
caggtgggccctgtgaaagtggtatccctctattccactcttcccccagctatgcagcag
aaaatttttgaaccacctccacctccactaaaggagggtgggcctcctggaaggaaaatt
attgtgtcaacaaacatagctgaaacctccttaacaattgatggcattgtctatgttatt
gaccctggtttctctaagcagaaggtttataacccacgagttcgtgttgagtctttatta
gtgtcaccaatatcaaaagcaagtgcgcatcagagatcaggacgtgctggaagaactcaa
ccagggaaatgttttagactttatactgagaaaagtttcaataacgatctacagcctcag
acctatcccgaaattttgagatcaaatcttgccaactctgttcttaccttgaagaaactg
ggtatagatgatttagtgcattttgatttcatggaccctcctgcccctgagaccttgatg
cgtgcattggaagtgttgaattacttgggagcactggacgatgatggtaccttaacaaag
ttgggagagattatgagtgaatttcccttggatccacagatgtcaaagatgcttattgtg
agtcccgaattcaactgttcaaatgagattctgtcaatgtgtgccatgctttcagccccc
aattgctttgtccggcctagggaagtacaaaaagctgctgatgaagctaaagctaggttt
gggcacattgatggggatcatctcacactcttgaatgtctaccatgcatacaagcaaaat
aatgaggatccctcttggtgctacgataactttgttaatcaaagggcactgaaatcagct
gataatgttagacaacagttagtgcgtatcatggcccggtttagcctcaagttatgcagc
accgacttcaatagccgtgactactacatcaacataaggaaagctatgctagctggatat
ttcatgcaggtagctcatctggggcgaacaggacattacttgacagtgaaagacaatcag
gtggtgcatttgcatccatcaacttgtcttgaccacaaacctgaatgggttatctataat
gaatatgttcttactagtcgaaattttattcgcactgtgacggacattcgtggggggtgg
ttggttgatatagcaccacactactatgatttgtcaaattttcctcattgtgaggccaag
ggtgttcttgagagactctacaagaagaaaaagaagggaaaggaggaagccaggaagcac
aaatga
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