Arachis hypogaea (peanut): 112695728
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Entry
112695728 CDS
T07294
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 24
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112695728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112695728
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112695728
Spliceosome [BR:
ahf03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
112695728
Complex B
112695728
Complex C
U2 SnRNP specific factors
112695728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
112695728
NCBI-ProteinID:
XP_025603971
LinkDB
All DBs
Position
6:complement(7452290..7456243)
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AA seq
780 aa
AA seq
DB search
MSKRKFGFDGFGINRQSTYNFERSQAPQRLYVPPSSRHGHDNYEDTDLDNIDYDDNDAAG
NDNKAAGDGGGGNNGGDEEIDPLDAFMEGIHEEMRTAAPPKPKEKAEDRYKDDEEDDPME
SFLRAKKDLGLTLASEALHAGYDSDEEVYAAAKAVDAGMIEYDSDDNPIVLDKKKIEPIP
PLDHSSIDYEPFNKDFYEEAPSISGMSEQDVTEYRKSLAIRVSGFDVPKPIKTFEDCGFS
QQIMGAIKKQGYEKPTSIQCQALPVILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPEL
QKEEGPIGVICAPTRELAHQIYLESKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVV
ATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATM
PRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPEMIDQGDV
LVFASKKATVDEIESQLAQRGFKVAALHGDKDQASRMETLQKFKAGVYHVLIATDVAARG
LDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLIAA
GQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGGGGGGGGGRGVRGVDFGLGIGYN
PESNNASSNTPPSRSAAVNSLRTGMMSQFRSSFVAASSNSQNQGYNNNTSMAANKRPALR
GFVSGGSIGGDINSHNNAASPSPATAAVNSGGPNSGVNPAQNNSNSSKPRERRRPSGWDR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaggaagttcggatttgacggtttcggcataaaccgccaatccacctacaac
ttcgagcgatcccaagctcctcagcgcctctacgtccctccctcttcacgccacggccac
gacaattacgaggacaccgacctcgacaacatcgattacgacgacaacgacgccgccgga
aacgacaacaaagctgccggcgatggcggaggtggcaataatggtggcgacgaggaaatc
gatccgctggacgccttcatggaagggattcacgaagagatgaggacggcggcgcctccg
aagccaaaggagaaggcagaggacaggtacaaggacgatgaggaggatgatccaatggag
agcttcttgagggcgaagaaggacctagggttgacgttggcctcggaggctctgcacgct
ggctacgattctgatgaagaggtttatgctgctgctaaggctgtggatgccggtatgata
gagtatgattctgatgataatcctatagttcttgacaagaagaagatcgaacccattcct
ccacttgatcacagttctattgactatgagcccttcaataaggatttctatgaggaggca
ccttcaatttcaggtatgagtgagcaagatgtcactgagtaccggaagagtttggctatt
cgtgtgtcgggatttgatgtgcctaagccaataaagacatttgaggactgtgggttctct
cagcaaattatgggtgctataaagaaacaaggttatgagaagccaacgtctatacagtgc
caagctttaccagttattctttccggtagagatatcattggcattgcaaaaactggttct
ggtaaaactgctgcttttgtgcttcctatgattgtgcatatcatggatcagcctgaactt
cagaaggaagagggtcctataggagttatatgcgcacctacaagagaattggcacatcag
atatatcttgagtccaagaaatttgcaaaagcatatggtatacgtgtgtctgctgtctat
ggtggaatgtcaaaacttgaacagttcaaagaactcaaggcaggttgtgagatagtagtt
gccacccctgggagattgatagacatgctaaaaatgaaggccttgacaatgactagagca
acttacctggtgcttgatgaggctgaccggatgtttgatcttggatttgagccacaagta
aggtccattgttggtcagattaggccggatcgtcagactttacttttttctgcgacaatg
cctcgtaaagttgaaaagttggctagagagatccttagtgatcctgttagagtaacagtt
ggggaggtgggaatggcaaatgaagacattactcaagttgtccatgtaattccttctgat
gctgaaaaattgccttggcttttggagaagttgcccgagatgatcgatcaaggtgatgtc
ctagtatttgcttccaagaaggctactgtggatgaaattgaatcacaattggctcagaga
ggctttaaagttgctgccctgcatggtgataaagatcaagcttctcgcatggaaactttg
cagaagtttaaagctggtgtctaccatgtgcttattgcaactgatgttgctgctcgtggt
cttgatatcaagtcaattaaatctgtggtaaactttgatattgcaaaagatatggatatg
catgtccatcggattgggagaacaggccgtgctggtgacaaggatggggttgcatacact
cttataactcaaaaagaagcacgctttgctggcgaactggtgaatagcttgattgctgct
ggtcagaatgtatccatggagttgatggatcttgctatgaaggatgggaggttcaggtca
aaacgtgatgcaagaaaaggaggtgggaaaaaaggcaaagggagaggaggaggtggtggt
ggtggcggtggcggccggggtgtgcgtggagttgattttggccttggtattggatataat
cccgagtccaacaatgcttcatctaacacccctccgagccgctctgctgctgtaaattct
ttacgaacaggaatgatgtcacagtttcggagtagctttgttgctgcttcctctaactcc
caaaatcaaggatacaataacaatacaagtatggctgcaaataagagacctgcacttcgc
ggttttgtatctggtggatcaattggcggggatataaattctcataataatgctgcttca
cccagtcctgctacagcagcagtaaactccggtggcccaaattccggtgtaaaccctgct
cagaacaactcaaacagctctaaacccagagaaaggaggaggccatcaggctgggatagg
tag
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