Arachis hypogaea (peanut): 112695984
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Entry
112695984 CDS
T07294
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112695984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112695984
Spliceosome [BR:
ahf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112695984
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_SPT8
eIF2A
WD40_like
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
112695984
NCBI-ProteinID:
XP_025604321
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Position
6:complement(10980431..10983572)
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AA seq
585 aa
AA seq
DB search
MEVDEENVPSNTASESAIGPSSDVSVNAATPPHPIQPIIPPPVIPLSAPVPPMAPIPTIP
PPSIVPPIAPIPAPPVVRPLAPLPPRPPPIRPPVAQNGGVGSEDSDSDNDDAGGRVNQGA
GEYEISEESRLVRERQEKAMQELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREM
ERRDRLRMIMAKLDADGQLEKLMKAHEDEETVATAGKDGDEEEIQYPFYTEGPKSLRDAR
IDIAKYSLVRAALRLQRARRRKDDPDEDVDAEMDWALKQAANLSLEFSEIGDDRPLSGCS
FSRDGKSLATCSLTGAAKLWSMPKVIKSCTLKGHTERATDVAYSPVHNHLATASADRTAK
YWNDQGSLLKTFEGHIDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRS
VYGLAFHQDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGICFSPNGYHLATGGE
DNTCRIWDLRKKKSMYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKT
LSGHEAKVTSVDVLGDGSYIATVSHDRTIKLWSTNMSSEQTMDVD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggatgaagaaaatgttccatcaaatactgcttctgaatccgccataggacct
tcctctgatgtttccgtcaatgctgcaactccaccacacccaattcaacccattattcca
ccacccgttattcccctttctgcgcctgtgccacctatggctccaattcccaccattcct
cccccttctattgtgcctcccatagccccaattccggcccctcctgtggtgcgtccattg
gcgcccctccctcctcgcccgccgcctattagaccacctgtggcgcaaaatggcggggtt
ggttcggaagattctgattcggacaacgatgatgccggtgggagggttaaccagggtgcc
ggggagtatgagatatcggaggagagtaggctggtgagggagaggcaggagaaagcaatg
caggagctcatgatgaagaggcgtgctgccgctttggctgttccgaccaatgacatggct
gtgcgcgctcgccttcgccggcttggtgagcccataactttgtttggtgagagggagatg
gagaggagggacaggttgaggatgattatggcgaagctggatgccgatggccagctggag
aagctgatgaaggctcatgaggatgaagagactgtggctactgccgggaaggatggggac
gaggaagagatacagtatcccttttacaccgaagggccaaagtctctccgtgatgctagg
attgatattgctaagtattctttggttagggcagcattgcgtcttcaacgtgcccggaga
agaaaagatgatccggatgaagatgtggatgcggagatggattgggcattaaagcaggct
gctaatttgagtcttgaattcagtgaaatcggagatgatcgaccgctttctggttgctcc
ttctcacgagacggaaagtcgcttgctacttgttctctaaccggagctgccaagttgtgg
agcatgcctaaagtcatcaaatcttgtaccttaaagggacacacagagcgtgcaactgat
gttgcttattctcctgtgcacaaccatttagcaactgcatctgctgatcggaccgcaaaa
tattggaatgaccagggatctttattgaagacattcgagggtcatattgaccgtcttgca
cgaattgctttccatccatcaggaaagtacctaggcactgctagctttgacaagacatgg
agattatgggacgtagaaacaggtgaggagttgcttcttcaagaaggccacagtaggagt
gtatatggtttagcttttcatcaagatggatcgttagctgcatcttgtggactggatgct
ttggctcgtgtttgggatctccgaactgggcgaagcattcttgcacttgaaggtcatgtc
aagccggttcttggcatttgcttttcacctaatggatatcatttagccacaggcggtgaa
gacaacacttgtcgcatttgggatttgagaaagaagaaatccatgtacaccatccctgct
cactccaacttgatatcacaagttaagtttgagccgcaggaaggttactttttggtaact
gcctcatatgacatgacagctaaggtgtggtcagcccgtgatttcaagcctgtgaagaca
ctatctgggcatgaagcaaaagttacttctgtggatgttcttggtgatggcagttatatt
gctactgtctcacatgatcgtaccataaaattgtggtccaccaatatgagtagtgaacaa
actatggatgttgattag
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