Arachis hypogaea (peanut): 112696166
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Entry
112696166 CDS
T07294
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112696166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112696166
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112696166
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
112696166
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
RRP40_S1
ECR1_N
EXOSC1
S1
Motif
Other DBs
NCBI-GeneID:
112696166
NCBI-ProteinID:
XP_025604572
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Position
6:complement(13825162..13827731)
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AA seq
320 aa
AA seq
DB search
MRGLQLPLTQTQKVRLQNALQQLESLSSKVNSDASVTVADSISVNHEEGVLKGHGTADIN
GDLVATLCGVVERVNKLVYVRALRSSYKPEVGDIVIGRVVEVSQKRWRLEINYSQDAVLM
LSSMNMPDGVQRRRTAVDELNMRSIFEEKDVVCAEVRGFQRDGLHLQARSQKYGKLNRGQ
LLTVPPYLVKRQKQHYHHLEQYGVDLILGCNGFIWVGEHVEAKDDMVEDQVNHSNRNSAS
LEEQEKNYTALETRKYICRAANAIRVLSTLGFNMTLEIIKGVIDLSLSLNLDIHDMLGSE
FYVLVAEKEAERRSSSKKKR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagaggattacagttaccgttgacccaaactcagaaggttcgtctccagaacgctctg
cagcagctggagtcactctcctccaaggtcaactccgatgcctccgtcaccgtcgccgat
tccatttccgttaaccacgaggaaggcgtcctcaagggccacggaaccgcagacatcaac
ggcgacctcgttgccaccctctgcggcgtagttgagcgcgtcaataagctcgtctatgtc
cgcgccctgcgatccagctacaaacccgaagttggagacatcgtcattggacgtgttgtc
gaggtttctcaaaagcgttggaggttggagataaattacagtcaagatgcagttttgatg
ctttcttctatgaatatgcctgatggtgtccagagacggcggacagctgtggatgaacta
aatatgcgttcaatttttgaagagaaggatgttgtttgtgctgaagttcgtggtttccag
cgtgatggcttacatcttcaggcaagaagtcagaaatatgggaagctgaacagaggtcaa
ctgctaacagtcccaccttacttagttaagaggcaaaagcaacattatcatcatcttgag
caatatggtgttgatttgatacttggatgtaatggattcatatgggttggagaacatgtt
gaagccaaagatgacatggtagaagatcaagtgaaccattccaatagaaattcagcaagc
cttgaagaacaagagaaaaattatacggcattggagacaagaaaatacatatgcagggct
gctaatgctattagagtattatctactttgggtttcaatatgacattagaaatcatcaag
ggagttattgatttaagcctttcgctaaatcttgatatacatgatatgcttggttcggag
ttctatgttctggttgctgaaaaagaggctgaaaggagaagctcaagtaaaaagaagagg
tag
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