Arachis hypogaea (peanut): 112696925
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Entry
112696925 CDS
T07294
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112696925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112696925
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
112696925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
112696925
NCBI-ProteinID:
XP_025605660
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All DBs
Position
6:complement(91417220..91426486)
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AA seq
691 aa
AA seq
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MNVDRYLKELSGSSQRIPTEQSFHHFYLNFDEFKRPIDEIARRSQSMLESIGVTTHAWNT
GVDFPSDIDDAYEWVVDMNDELLEWFDESVSEVRKAREEDEEFEEVELENGFGLVRVKKE
GGGVGKKKVEAAGTTETTKPKVSFHLATVRKPQDVYDIVVNNTNVPFEHIWLEKSEDDQR
FIHPLEKHSYLEFVDKNLEGLVPMKPPAMECTPFKLVEDVKGLKELAAKLRAADEFAVDL
EHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRVHVGPYLREVFKDPTKKKVLHGADRDIV
WLQRDFGIYVCNMFDTGQASRVLKLERFSLQYLLLHLCGVTANKEYQNADWRQRPLPDVM
IRYGREDTHYLLYIYDQLRIKLFALSKESESSENPLVEVYKRSYDVCMQLYEKELLTEDS
YLHIYGLLGAGFNAQQLAVVSGLNEWRDILARSEDESTGFILPNKVLLEIAKQMPVTISG
LRRLTSSKLPYVDHNLDVIVNIVRHAIQNAAPFEEAALRLKETYAAKMKEARLKAAQEAS
VVDAAPVEDGVEASHLLDFEHTPEEESTVIDNSTCVNISETLPFSYDLKEDCSQHEDMNG
QVKIKSSCLTLELPQVVGGPIDAIADALSGDSASRNRLNPNEKVKEEIKLDRIRMSVKLE
PVSAAVSADTVMIDSSIDSGCMTQNNLLGSE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgaccgctacctaaaggagctctccggctcttcccagcgaatcccgacggag
cagagcttccaccatttctacctcaacttcgacgaattcaagcgcccgatcgacgaaatc
gcacgtcgctcgcagtcgatgctggagagcatcggcgtcaccacgcatgcatggaacacc
ggcgtggatttcccgtccgacatcgacgatgcttacgagtgggtggttgacatgaacgat
gagctcttggaatggtttgacgagtcagtgagcgaggttcggaaggcgagggaggaggac
gaggagttcgaggaggtggagctggagaacgggttcgggttggttcgagtcaagaaggag
ggaggtggtgttgggaagaagaaggtggaagcagcggggactacggaaacgacgaagccg
aaggtgtcgtttcacttagccacggttaggaagcctcaggatgtgtacgacattgtcgtt
aacaacaccaacgtgccgtttgagcatatttggttggagaagagtgaggatgatcagagg
ttcattcatcctttggagaaacactcttatttggagtttgttgataaaaatcttgagggt
ttagtgccaatgaagcctcctgcaatggaatgcactcctttcaagctagtggaggacgtc
aaaggattgaaggaattggctgcgaagctgcgtgctgctgatgaatttgcggtggatttg
gaacataatcaatatcgttcattccaaggtttgacttgcttgatgcaaatctcaaccagg
actgaggattttattgtagatactttaaagctccgtgtccatgttgggccttatctgcgt
gaagtctttaaggaccctacaaagaagaaggtcttgcatggagcagatcgagatattgtg
tggttgcaacgggattttggaatatatgtttgtaatatgtttgacacgggccaggcttct
agggtgttaaaattggagagatttagtttgcaatatcttttactacacttgtgtggggtt
actgcaaacaaagaataccagaatgcagattggagacaacgccctcttcctgatgttatg
ataagatatggcagagaagatacacactatctgctgtatatatatgaccaactgagaatc
aagttatttgctttgtccaaggaatctgaaagttctgaaaatcctctggtggaggtttac
aagcgtagttatgatgtctgcatgcaactatatgagaaagagcttctaacagaagactcg
tatcttcatatatatgggttgctgggggctggttttaatgctcagcagcttgctgttgtt
tcagggcttaatgaatggcgggacattttggctcgttcagaagatgagagtactggcttt
attttaccaaataaagtacttcttgaaatagcaaagcagatgcctgttactataagcggt
cttcggcgattgacatcatcaaagctcccatatgttgatcacaatcttgatgtcattgtc
aacattgtcagacatgccattcaaaatgctgctccttttgaagaagcggcactacgcttg
aaagaaacatatgctgcaaaaatgaaggaagcaagattgaaagcagcacaagaagcaagt
gtcgtagatgctgctcctgttgaagatggagtagaagcttctcatctgctagattttgaa
catacacccgaagaagaaagtactgtcattgataattcaacctgtgttaatatctcagag
acccttccattttcttatgatctgaaggaggattgctctcagcatgaagatatgaatgga
caagtaaaaattaaatccagttgtctaactttagagcttccacaggtagtaggagggcct
attgatgctattgctgatgctctgtcaggcgattcagcttcaagaaataggcttaatcct
aatgagaaggtcaaggaagagatcaagctagatcgcattaggatgtcagtcaagctggag
ccagtttccgctgctgtgtcggctgatacagtgatgatagactccagtatagattccggc
tgtatgactcagaacaacctattaggctctgaatga
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