Arachis hypogaea (peanut): 112697477
Help
Entry
112697477 CDS
T07294
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15 isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03013
Nucleocytoplasmic transport
ahf03015
mRNA surveillance pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112697477
09122 Translation
03013 Nucleocytoplasmic transport
112697477
03015 mRNA surveillance pathway
112697477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112697477
03041 Spliceosome [BR:
ahf03041
]
112697477
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112697477
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112697477
Spliceosome [BR:
ahf03041
]
Complex C
Other components
EJC/TREX
112697477
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112697477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
112697477
NCBI-ProteinID:
XP_025606451
LinkDB
All DBs
Position
16:complement(144323361..144329824)
Genome browser
AA seq
427 aa
AA seq
DB search
MGETKDEGYEEELLDYEEEDEKAPDSVGTKVNGEAAKKGYVGIHSSGFRDFLLKPELLRA
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
CHTRELAYQICHEFQRFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL
ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR
AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV
INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCANDVDVLNNVQSRFEVDIKQLPEQID
TSTYMPS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaccaaggacgaaggatacgaggaggagcttcttgactacgaagaggaggac
gagaaggcacctgactccgttggaaccaaagtcaacggtgaagctgccaagaagggctat
gttggtatccacagttcaggattcagagacttccttctgaagccagagcttctccgggct
attgtggactctggatttgagcatccttccgaagtgcaacacgaatgcatacctcaggca
atccttggaatggatgtgatttgtcaagctaaatcgggaatgggaaaaactgcagtgttt
gttctttcaactttgcagcagattgaccctgttgcaggacaagtttctgcacttgttctg
tgccacactagggaattggcataccagatatgccatgagtttcagaggttcagcacttac
ttacctgatctcaaggttgctgtcttctatggaggtgtcaacattaaagttcataaggat
ctactgaagaatgaatgccctcatattgttgttggtacacctggaagaatactagcactg
gctagggacaaggacctttcattgaagaatgttaggcatttcattttagatgaatgtgat
aagatgctggaatcactggacatgagaaaagatgtgcaagacattttcaagatgactccc
catgataagcaagtgatgatgttttctgcaacacttagcaaggaaattcgtcccgtctgc
aagaaatttatgcaagatccaatggaaatttatgttgacgatgaagccaagttgaccctt
catggacttgtgcagcactatattaaattgaaagaggaggaaaagaacaggaagctgaat
gaccttcttgatgcattggactttaatcaagttgtgatctttgttaaaagtgttagcaga
gcagctgagcttgacaaactacttgtggagtgcaacttcccatcaatatgtattcattct
ggaatgtcccaggaagaaaggttaaagcgatacaaaggttttaaggagggccacactagg
attcttgtggctacagatttggtcggtaggggaattgacatcgaacgtgtgaatatagtt
ataaactatgacatgcccgattctgcagacacttacttgcacagagtaggtcgagctgga
aggtttggcacgaagggcctagcaattacatttgtttcatgtgctaatgacgttgatgtc
ctcaacaatgttcagtccaggtttgaggttgatattaagcaacttcctgagcagattgat
acctctacctacatgccatcttga
DBGET
integrated database retrieval system
