Arachis hypogaea (peanut): 112697816
Help
Entry
112697816 CDS
T07294
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112697816
09123 Folding, sorting and degradation
03018 RNA degradation
112697816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112697816
03041 Spliceosome [BR:
ahf03041
]
112697816
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112697816
mRNA cycle factors
Stress granule specific factors
112697816
Spliceosome [BR:
ahf03041
]
Complex C
Other components
Complex C specific factors
112697816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_3
RBD_DEAH11
RRM_Nup35
RRM_7
YflT
RRM_RdRP1_2
RRM_MARF1
RBD_DGKtheta
DUF5062
Motif
Other DBs
NCBI-GeneID:
112697816
NCBI-ProteinID:
XP_025606936
LinkDB
All DBs
Position
16:149122726..149127693
Genome browser
AA seq
659 aa
AA seq
DB search
MAQIQVQHQSAVSAPPQNGVAAAPSPPLPAGAANGTNQFVTTSLYVGDLDPEVDERHLYD
LFNQVGQVVSVRVCSDLTTRRSLGYGYVNYSNPQDAARAIDVLNFTPLNNKPIRIMYSHR
DPSIRKSGTANIFIKNLDKAIDHKALHDTFSSFGHILSCKIATDASGQSKGYGFVQFDTE
ESAQNAIDKLNGMLINDKQVYVGHFLRKQDRDNALGKTTFNNVYVKNLSESVTDDDLKKI
FGEYGTITSAVVMRDADGKSKCFGFVNFENPEDAAKAVESLNGKKIDDKEWYVGKAQKKS
ERENELRRRFEQTVKESVDKYQGVNLYLKNLDDTINDEKLRELFSEFGSITSCKVMRDPN
GISRGSGFVSFSTPEEASRALTEMNGKMIAGKPLYVALAQRKEERRARLQAQFSQMRPVA
MTPSVAPRMPLYPPGAPGLGQQFLYGQGPPAMIPPQAGFGYQQQLVPGMRPGGAPMPSFF
VPMVQQGQRPGGRRGAGPVQQPQQTVPMMQQQLLPRGRYMRYPPGGRNMQDVPLPGVAGG
MLSVPYDIGGLPIRDGVGQPVGIQALATALANAPPEQQRTMLGEALYPLVDQLEHDAAAK
VTGMLLEMDQPEVLHLIESPDALKAKVAEAMDVLRNVSQQANAPADQLASLSLNENLVS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattcaggtgcagcaccagagcgcggtttcggctccaccgcagaacggcgtc
gcagccgctccttcgccgccgctgccggcgggtgctgcgaatgggacgaaccagtttgtt
acgacgtcgttgtacgtcggggatctggaccctgaggttgacgagaggcacctctacgat
ttgttcaaccaggtcgggcaagtggtttcggttcgtgtctgcagtgatttgaccactcgc
cgatcgctcggttacggttacgttaattacagtaaccctcaggatgctgcacgagcaata
gatgtactgaatttcactccactgaacaacaagcccattaggatcatgtattctcatcgg
gatcctagcattcgcaagagtgggactgcaaacatttttatcaagaatttggataaggca
attgatcacaaagctttacatgatactttttcttcttttggacatattctttcttgcaaa
atagcgactgatgcttctggccagtcaaaaggctacggttttgttcaattcgacaccgag
gagtctgcacagaatgcaatcgataagttaaatggcatgctgatcaatgataagcaggtc
tatgtgggtcatttcttacgtaagcaagatagagataatgctttgggtaagacgacattc
aataatgtctatgtgaaaaacctgtctgagtcggtgacagatgatgacttgaagaaaatt
tttggagagtatgggacaatcactagtgctgtagtaatgagagatgcagatggtaaatca
aagtgttttgggtttgttaattttgaaaacccagaagatgctgccaaagctgttgagtca
ctcaatggaaagaaaattgatgacaaggagtggtatgttggaaaagcccagaaaaaatct
gagcgagagaatgagctgagaagacggtttgagcaaactgttaaagaatctgttgataaa
taccaaggtgtgaacttgtatctcaagaacttggatgataccatcaatgatgaaaagcta
agagaactcttctccgagtttggttcaataacctcttgcaaggttatgcgcgatccaaat
ggaatcagtagaggatcaggatttgtttcattttcaactcctgaggaagcatctcgagct
cttacggagatgaatggtaaaatgattgctgggaagcctctgtacgttgcccttgctcag
agaaaggaagagagaagagctaggttacaggcacaattttcacaaatgaggcctgttgcg
atgacaccttctgttgcaccacggatgccactttatcctcctggtgctcctggtttaggg
caacaatttttgtacgggcaaggacccccagccatgattcccccacaggctggatttggc
taccagcagcaacttgttcctgggatgaggcccggtggtgctccaatgcctagcttcttt
gttccaatggttcagcagggtcagcgcccaggtggacgacgaggagctggtcctgtgcaa
caacctcagcagacagtgccaatgatgcagcaacagttgcttccaaggggacgctatatg
cgttaccctcctgggggtcgcaatatgcaagatgttccactcccaggggttgctggagga
atgttgtcagtcccctatgacataggtggtcttccaatccgcgatggtgtagggcagcca
gttggaattcaggccttggctactgctcttgcaaatgctcctccggaacagcagaggact
atgcttggtgaagctttgtacccgctagtggaccagctggagcatgatgcagctgctaaa
gttacaggcatgctattggagatggatcagccagaggtattgcacctgattgaatcacca
gatgctctcaaggcgaaagttgccgaagcaatggatgtgttgagaaatgtttctcaacaa
gccaacgcccctgctgatcaactagcctcactctccttgaatgagaatcttgtctcttag
DBGET
integrated database retrieval system
