Arachis hypogaea (peanut): 112702072
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Entry
112702072 CDS
T07294
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112702072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112702072
03012 Translation factors [BR:
ahf03012
]
112702072
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112702072
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112702072
Translation factors [BR:
ahf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112702072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
R3H
DEAD
HA2_C
HA2_N
nSTAND3
ATPase
Ank_2
AAA_22
Ank_5
AAA_19
AAA_14
PhoH
AAA_7
ABC_tran
Rad17
DUF6639
AAA_23
Sigma54_activat
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
112702072
NCBI-ProteinID:
XP_025608739
LinkDB
All DBs
Position
7:complement(3967379..3974362)
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AA seq
1175 aa
AA seq
DB search
MTKRKEKNKGNPLQRQNPKVEEVTRIRISQILEQFRASKDEVYKFEAGLSNEDRALVHQL
AQKMGFKSKSSGYGKERRVAVHKIKKKVETNNGFGNLPCFAFSQEASQVLGNLFAHYPPG
DGSLWEMIGEDSGSTEKFKPKKDDIFARPSMSKADIAKKMEALNSRIMTTSNLKQITEDR
SKLPIASFKDTIVTTIESHQVVLISGETGCGKTTQVPQFILDHMWSKGEVCKIVCTQPRR
ISATSVSDRIASERGEGIGESVGYKIRLEGKGGRNSSIVLCTTGVLLRVLVSKSSCSSKT
GPIKDDISGITHIIMDEIHERDRYSDFMLAIIRDMLPSYPRLRLVLMSATIDAARFSQYF
GGCPIINVPGFTYPVKTFYLEDVLSIIKSNDGGNHLEDNTTSETPINNCELSEEEKLSID
EAINLAWFNDEWEMLSELVSSEGSLKLFNYQHSLTGLTPLMVFAGKGRVGDMCMLLSLGA
DCHLRSHDGNIALEIAERENQQEAAEILKKHMDNNFSNSIEEKQLLDKYLATVNPELIDE
VLIEQLIRKICVDSEDGGILVFLPGWDDINRTRERLLASSFFKNQSKFMVIALHSMVPSM
EQRKVFKRPPHGCRKIVLSTNIAETAITIDDIVYVIDTGRMKEKSYDPYNNVSTLQSSWV
SKASAKQREGRAGRCQPGICYHLYSKIRAASLPDFQIPEIRRISIEELCLQVKLLDPTCK
IEEYLSKTLDPPVLESIRHAILVLQDIGALSTDEKLTQLGEKLGSLPVHPLTSRMLFFAI
LMDCLNPALTVACASDYRNPFTLPMLPEERKRASAAKAELASLYGGSGDQFAVVAAFECW
SNAKNMGLESRFCSQYFVSSSAMHMLSGMRKQLQKELVRSGFVPEDTTSYSMNAHDPGVL
HAVLVAGLYPMVGRFSPNKKGKRAIIETAGGDKVRLHNHSINFKLSLKKNAEHTLIVYDE
ITRGDMGMSIRNCTVVGPLPLLLLSTEIAVAPAQDNDNGDGGDGSDYDNDDDNDEESEDE
DEVKLEDAMEVDNKSSGDREDKIMSSPENIVKIIMDRWLYFGSTAMDVAQLYCLRERLSA
AILYKVTHPRNSLPPMLGASMQAIACILSCDGCSGLPVTSDGVDTLATMVNTTYLGKPAP
GTRRLGKKQKGQSTEHINSEESQIPGPSKGNISAS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagaaaggagaagaacaaaggaaatccacttcagcgtcagaatcccaaggtt
gaggaagttaccaggatccgcatttcacagattctcgaacagtttcgagcttccaaagat
gaagtgtacaaatttgaagctggtttgtcgaatgaagaccgtgctttggtgcatcaatta
gcccagaaaatggggtttaagtctaaaagttctgggtatgggaaagaaaggagggtggct
gttcataaaataaaaaagaaagttgaaaccaataatgggtttgggaatcttccttgtttt
gcattttctcaggaggcaagccaggtactaggtaatttatttgcccattatccgcctggt
gatggaagcctgtgggagatgattggagaggatagtggctctactgagaaattcaaaccg
aagaaagatgacatttttgctagaccttctatgtcgaaagctgatattgctaagaaaatg
gaagcccttaactctagaatcatgacaacctcaaacctgaaacagatcactgaagataga
tctaagctgccgattgcatccttcaaggataccattgtgacaactattgaatctcaccag
gtagttctgatatctggtgagacaggttgtggaaagactactcaggttcctcaatttatt
ttggatcatatgtggagtaagggtgaggtatgcaaaatagtttgcacccagcctcgacgt
atctctgcaacttcagtgtctgacagaatagccagtgagagaggagagggtattggagaa
agtgtaggatataagatacgactggaaggcaaaggtggaagaaactcatcaattgtgcta
tgtactactggagttctcttaagggtgttggtatctaaaagttcttgttcatcaaagacg
gggcccataaaggatgacatttctggcattactcacataattatggatgaaattcacgaa
agggaccgatactcagacttcatgttggcaatcatcagagacatgctcccttcatatcct
cgtttacgtctggtacttatgagtgctacaattgatgctgcgagattttctcagtatttt
ggtggatgcccaatcatcaatgttccgggattcacttatccggtcaaaactttctatctg
gaggatgtactttctattataaaatccaatgatggtggtaatcatcttgaagataatacc
acatctgaaactccaataaacaactgtgagctaagtgaagaagagaagctctctattgat
gaagctattaatttggcttggtttaatgatgagtgggagatgctgtcagagttggtttct
tccgaaggaagcctgaaactgttcaattaccagcattcgttaactggccttactccatta
atggtgtttgccggaaaaggtagggtgggtgatatgtgcatgctcttatcattaggggca
gattgccatttgaggtcccatgatggaaacattgctctagagattgccgaaagggaaaac
cagcaagaagcagccgaaatactcaaaaagcatatggataataatttttcgaactccatt
gaagagaagcagttacttgataaatatcttgctacggtcaaccccgaacttattgatgaa
gttctaatagagcagctgataagaaaaatatgcgtagattcagaagatggaggtatcctt
gtctttctcccaggatgggatgatataaacagaacacgtgaacgattgcttgcgtcctct
tttttcaagaatcaatccaagtttatggtcatagctctgcattcgatggttccaagcatg
gagcagaggaaggtatttaagcgcccacctcatggttgccgcaaaatagttctttcaacc
aatattgctgaaacagccatcaccattgatgatatagtgtatgtcatagatacaggacga
atgaaagaaaaaagttatgatccttataataatgtctcaactcttcaatcatcttgggtt
tcaaaagcaagtgctaagcagcgagaggggcgtgctggccgttgtcaacctggtatttgc
tatcatctgtattcaaagattcgagcagcttctttgccagattttcagattccagaaatt
aggagaatatctatcgaggagctttgtctgcaggtgaagttgcttgacccaacttgcaaa
atagaagagtaccttagcaagacattagatcctccggttttggagtccatacgtcatgca
attttagttctacaagatattggggcattgtctactgacgaaaaactcacacagctcggg
gagaaacttggttctctccctgttcacccattaactagccggatgcttttttttgctata
ttgatggactgtctcaatccggctttaacggtagcatgtgcatctgattatagaaatcca
tttacacttccaatgttgcctgaagaaaggaagagagcttccgctgccaaggctgagctt
gcttctctatatgggggctctggtgatcaattcgctgttgtagctgcatttgaatgctgg
agtaatgcaaagaatatgggtctagaatcccgcttttgttctcagtattttgtttcttcg
tctgctatgcatatgttatctggcatgcggaagcaacttcagaaagaactcgttcgaagt
ggctttgttcctgaagatactacgagttacagcatgaatgcgcatgaccctggtgtactc
catgcagttctagtcgcaggtttgtatccaatggttgggagattttcgccgaacaaaaaa
gggaaaagggccataattgaaactgctggtggggataaagttcgcttgcacaatcattcc
ataaattttaagttgtcgttaaagaaaaacgcagagcacacgttaattgtgtatgatgag
attactcgcggcgacatgggaatgagcatacggaactgtacagttgttggaccacttcca
ctcttgttgctttcaacagagattgctgttgccccagcacaggataatgataacggtgat
gggggtgatggaagtgattatgacaacgatgacgataatgatgaagagagcgaagatgaa
gatgaagtcaaactcgaagacgcaatggaagttgataacaaatccagtggtgacagagaa
gataagattatgtcttctcctgaaaatatagttaaaataatcatggaccggtggctttat
tttggttcaacagcaatggatgttgctcagctttactgtctgagagagcgattatcagca
gcaattctatacaaagtgacacatccaagaaattctcttcctccaatgctaggggcatct
atgcaggctatagcttgtatcctgtcatgcgacgggtgttcaggtttgccggtgacatcg
gatggcgtggacacactggctactatggtcaatacaacatatttgggcaagccagctccg
ggaacaaggcgactggggaagaagcaaaaagggcagtctacagaacatataaattccgag
gagagtcaaatccctgggccttctaaaggcaacatatctgcatcttag
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