Arachis hypogaea (peanut): 112705583
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Entry
112705583 CDS
T07294
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-I
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112705583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahf03021
]
112705583
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112705583
Transcription machinery [BR:
ahf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112705583
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112705583
U7-dependent histone pre-mRNA processing factors
112705583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
112705583
NCBI-ProteinID:
XP_025612235
LinkDB
All DBs
Position
8:1334243..1337151
Genome browser
AA seq
701 aa
AA seq
DB search
MASTATTQGPGPGAKRRDGGSSMSERKREEEQLIVTPLGAGNEVGRSCVYMSYKGKTILF
DCGIHPAYYGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLQKTTFRGRVFMTYAT
KAIYKLLLSDYVKVSKVSVEDMLYDEHDINRSMDKIEVIDFHQTIEVNGIRFWCYTAGHV
LGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQHHQPRHTRE
KRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCL
TVYETYTLSMNDRIKNAKSNPFAFKYISALSSIEVFKDIGPSVVMASPSGLQSGLSRQLF
DMWCSDKKNSCIIPGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHADSAQ
TSAFLEELNPPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMA
KTIGKLAEKTPEAGETVSGLLVKKGFAYQIMAPDDLHVFSQLSTASIAQRITIPYSGAFS
IVQHRLKQIYESVESSVDEESGVPTLEVHECVMVKHESEKHVSLHWSSDPISDMVSDSIV
ALILNISRDAPKIIDDSDAIKIVEENEKKAEKVMHALLVSLFGDVKIGENGKLVINIDGN
VAELNKESGEVESENEGLKERVKTAFRRIQSSVKPIPPSAA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacggcgacaacacagggaccggggccaggtgcgaagaggcgggacggcggt
tcatcaatgagcgagaggaagagagaggaggagcagctgatagtgacgccgctgggagcg
gggaacgaagtagggcggtcgtgcgtttacatgagctacaaaggaaagaccatcctcttc
gattgcggcatccaccctgcctactacggcatggcggctctcccttacttcgacgagatc
gatccctcaaccgtcgacgtcctcctcatcactcacttccatctcgaccacgccgcttcc
ttgccatacttccttcagaagaccaccttccgcggccgcgtcttcatgacctacgccacc
aaagctatctacaagctcctcctctccgattatgtcaaggtcagcaaggtctccgttgag
gacatgctctacgacgagcacgatatcaaccgctccatggataaaatcgaggttattgat
ttccatcaaactatagaagtgaacggtattcgattctggtgttatactgcaggccatgta
cttggtgctgctatgttcatggtggacattgctggagtccgagtgctttacaccggagac
tattcacgggaggaagaccggcatcttcgagctgccgagaccccccagttctcccctgat
atatgcattatagagtccacatatggtgtgcagcaccatcagcctcggcacacacgagag
aaacgcttcaccgatgttatccattccaccatatctcaaggaggtcgtgtgttgattccg
gcatttgcccttggtcgtgcacaggagctcctccttatccttgatgaatattgggcgaat
cacccggagctccagaatatacccatctattatgcttctcctcttgcaaaaaaatgcctg
actgtgtatgagacatacaccctttccatgaatgatagaatcaagaatgcaaagtcgaat
ccatttgctttcaaatacatatcggctttgagcagcattgaagtcttcaaagatatagga
ccatctgtggtgatggcaagccctagtggtcttcagagtgggttgtcacggcaattgttc
gatatgtggtgctctgataagaaaaattcttgcattataccggggtatgtggttgaaggg
acattggcaaaaaccatcatcagtgaacccaaagaggtcactctcatgaacgggctcact
gcacctctcaacatgcaggtgcactacatttccttttcggctcatgctgattctgctcaa
acaagtgcattcttagaagagctcaatcctcctaacataattcttgttcatggggaagct
aatgagatgggaaggctcaaacagaagctcatgagtcaatttgctgatcggaacactaag
attcttactccaaaaaactgtcaatctgttgagatgtatttcaattcgcagaaaatggca
aaaaccattggcaagcttgctgaaaaaacgcctgaagccggtgaaactgttagtggtctg
ctagtgaaaaaaggctttgcatatcagataatggcacctgatgatctccatgtcttctca
cagctatcgacagcaagcattgctcagaggatcaccatcccatattcaggtgcctttagt
attgtacagcatagactaaaacagatatacgagagtgtggagtcctctgtggatgaagaa
tctggagttccaacattggaagtccatgagtgcgtgatggtgaagcatgagtccgagaag
catgtttctctgcactggtcatccgatcccatcagtgacatggtatcagactccattgtt
gctctaattttaaatatcagtcgcgatgccccaaaaataatagacgattcagatgccata
aaaattgtagaagagaatgagaagaaagcagagaaggttatgcatgcacttctcgtctcg
ctctttggagatgtaaagattggagaaaatgggaagttggtgattaacattgatggcaat
gtggcagagctcaataaagaaagtggagaagttgagagtgaaaatgaaggccttaaggaa
agagttaaaaccgcatttcggcggattcaaagttctgtgaagccgattcctccttctgca
gcgtag
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