KEGG   Arachis hypogaea (peanut): 112706036
Entry
112706036         CDS       T07294                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ahf  Arachis hypogaea (peanut)
Pathway
ahf03030  DNA replication
ahf03410  Base excision repair
ahf03420  Nucleotide excision repair
ahf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ahf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112706036
   03410 Base excision repair
    112706036
   03420 Nucleotide excision repair
    112706036
   03430 Mismatch repair
    112706036
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahf03032]
    112706036
   03036 Chromosome and associated proteins [BR:ahf03036]
    112706036
   03400 DNA repair and recombination proteins [BR:ahf03400]
    112706036
DNA replication proteins [BR:ahf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    112706036
  DNA Replication Termination Factors
   ELG1-RFC complex
    112706036
Chromosome and associated proteins [BR:ahf03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    112706036
DNA repair and recombination proteins [BR:ahf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     112706036
  Check point factors
   HRAD17(Rad24)-RFC complex
    112706036
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_16 AAA_22 Rad17 RuvB_N Mg_chelatase AAA_24 AAA_5 AAA_11 AAA_14 ADK AAA_assoc_2 DEAD SLFN-g3_helicase AAA_2 ResIII nSTAND3 AAA_28 AAA_30 PhoH AAA_19 AAA_25 AAA_7 NPHP3_N RNA_helicase DNAX_ATPase_lid TIP49 ATPase_2 Parvo_NS1 AAA_18 bpMoxR NB-ARC DUF815 IstB_IS21
Other DBs
NCBI-GeneID: 112706036
NCBI-ProteinID: XP_025612904
LinkDB
Position
8:10236796..10244693
AA seq 341 aa
MAPIMQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKGGYPCPPYKIIV
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
NRILYICNEEGLNLDAKALSTLSSISQGDLRRAITYLQSAARLFGSSISSEDLISVSGVV
PAEVVEAILKACKSGNFDSANKEVNNFIAEGYPASQILTQLFEAILDDDISDEQKARIAK
KLGEADKCLVDGADEYLQLLDTVSTTMQAFCNMPEGFAYGS
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggcgccaatcatgcaatcctctcagccttgggtcgaaaaataccgaccaaaacaagtg
aaagacgtagctcaccaagacgaagttgttcgtgtcctcaccaacactcttgaaactgga
agctgcccccacatgctcttctatggaccccccggcaccggaaaaacaaccactgctctt
gcaatagctcaccagcttttcgggcctgagctttacaagtctagggtgctggagctcaat
gcaagtgatgaccgtgggattaatgttgttcgcaccaagataaaggattttgcagccgtc
gccgttggtactaatcagcgcaagggtggttatccttgcccaccatataagattattgtc
ttggatgaggcagattcaatgactgaagatgctcagaatgccctgaggcgaacaatggaa
acttactctaaagttactcggttctttttcatatgcaactacatcagcaggatcatagaa
ccactggcttcaaggtgtgcgaaattcaggttcaagccattgtcagaagagatcatgagc
aaccgaatactgtacatttgcaatgaagaaggactcaatcttgatgctaaggctctttca
accctgagttctatctctcaaggagatcttcgtcgggctatcacatacttgcagtcagca
gctcgattatttggatcttccatttcttcagaggacctgatttcagtatctggggttgtt
ccagcagaggtagtggaggcaattctgaaagcatgcaaaagtggaaattttgattcagcc
aacaaggaagtaaacaatttcattgcagagggatatccagcctctcagatactaactcag
ttatttgaggccattcttgatgatgacatatcagatgaacagaaagcaagaattgccaag
aagctgggagaagcagataagtgtctggttgatggtgctgatgaatacttgcagcttctt
gacacagtcagcactacaatgcaagctttttgtaacatgccggaaggatttgcttatggg
agttag

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