Arachis hypogaea (peanut): 112706073
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Entry
112706073 CDS
T07294
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03022
Basal transcription factors
ahf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112706073
09124 Replication and repair
03420 Nucleotide excision repair
112706073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahf03021
]
112706073
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112706073
Transcription machinery [BR:
ahf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112706073
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112706073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
112706073
NCBI-ProteinID:
XP_025612953
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All DBs
Position
8:10982327..10986105
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AA seq
297 aa
AA seq
DB search
MPSAPSKLYSDDVSLLVVTLDTNPFFWSTFSFPFSEFLSHVLAFLNSILLLSQLNQVVVI
ATGCNSCTYLYDSSSDKNHGSTTGSMPSLYSDLLHNLEVFLAGDQQLAKPRVNAAGGGAP
PPSLLSGSLSMALCYIQRAFRSGPIHPQPRILCLQGSADGPEQYVAIMNSIFSAQHSTVP
IDSCYIGSNNSAFLQQASYITGGIYYRPPHLDGLFQYFSTVFATDLHSRAFLRLPKSVGV
DFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQSNVPSSTDRKRKA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgctccttcaaagctctattcagatgacgtcagcctcctcgtggtgacgctc
gacaccaaccctttcttctggtccactttctccttccctttctccgaattcctctctcat
gtgcttgcgtttctcaactcgatcctgcttcttagtcagctcaatcaggttgtggttatc
gccactggctgcaattcctgcacctacctctacgattcttcttccgataagaaccatggc
tccaccaccggttccatgccctccctctactccgatttgctgcacaatctcgaggttttc
ctagctggggaccagcaattggcaaagcccagggttaatgctgcaggtggaggagctcct
cctccttcgctcctttcgggatccttgtccatggcgctttgttatatacagagagctttt
cgttcggggcccattcatcctcagcctcggattttgtgtttgcaaggatctgctgatgga
ccagaacagtatgtggcaatcatgaattcaatattctctgcgcagcactcaacagtccct
atagattcttgttatattggttctaacaattctgcattcctccaacaggcttcgtacata
actggtggcatatattacaggcctccccatttggatgggcttttccaatatttttcaacg
gtgtttgcaactgatttgcattctcgtgcctttttgcggcttcctaaatctgtgggtgtg
gattttcgtgcatcgtgcttctgtcataagcaaacaattgacatgggctatgtatgctct
gtatgcttatccatattctgtgagcatcatgataaatgttcaacttgtgggtctgtattt
ggccaagctcaatcaaatgttccctcatctactgaccggaaaagaaaagcttga
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