Arachis hypogaea (peanut): 112706222
Help
Entry
112706222 CDS
T07294
Name
(RefSeq) protein ALTERED SEED GERMINATION 2
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
ahf
Arachis hypogaea (peanut)
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ahf04121
]
112706222
Ubiquitin system [BR:
ahf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112706222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
TPR_2
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
112706222
NCBI-ProteinID:
XP_025613191
LinkDB
All DBs
Position
8:complement(13960872..13970975)
Genome browser
AA seq
759 aa
AA seq
DB search
MDSVPFHDGNIHHILETRYLHSRQDVNHSLQTHSSLIRRLTQERELEGHLGCVNAVAWNS
RGSLLISGSDDTRINIWNYADRKLLHSIDTGHTANIFCTKFIPETSDEIVVSGAGDAEVR
LFNLSHLNGSAENAIAPSALYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFREGTS
CPPAGSSHQECRSVLLDLRSGAKRSLADPPKQVLALKSCDISSTRPHLLLVGGSDAFARL
YDRRMLPPLSSCRKRMSPPPCVNYFCPMHLSDRGHPSLHLTHVTFGPDGDEVLLSYSGEH
VYLMNVNHAGLNDMQYTSGDVSKLMTYSPTINGMELQPSVSSVFPNGFSIKKNVAAKIDY
CRKLIKYAEKTLNDGPYYGIEACNEVLNCYSLTIGPALKYECLCIRAALLLKRKWKNDAH
MAIRDCCAARKIDNYDYKALYYMSDALSQLGRHKEALDFAVAAQLLAPSIPEVAERVEKA
KKDISSAEAEKNNKTNDGGSRFDSRGGRILSLSDILYRSEANSDASQDGPRSERDDSDYD
EELELDFETSMSGDEGHDVESNILHGSLNLRIHRRGDSRESTGANGTVESPSSSSQNDKA
YQSEAAIDMNQRFIGHCNVGTDIKQASFLGQRGEFVASGSDDGRWFIWEKGTGRLIKMLN
GDESVVNCVQCHPFDFVVATSGIDSTIKLWTPSAPVPSAVAGGAAGPETADVLVAMESNQ
QKLSRGRDSILPFELLEPFRMHEFPEGSLRLRPFECAQS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggactctgttcctttccacgatggcaacatccaccatattctcgaaacccgatacctt
cactctcgccaagatgttaatcatagcttgcagacacactcctcgttgattcgcaggctt
actcaggagagagagttagagggccaccttggctgtgtcaatgctgtggcttggaattcc
agaggctcattattgatatctggatcagatgatacacggatcaatatttggaactatgct
gatcggaaacttctacattcgattgacactggtcatactgcaaatattttctgtacaaag
tttataccagaaacttctgatgagattgtagtctctggagctggagatgctgaagtccga
ttatttaatttgtctcacttaaatggatctgctgaaaatgccattgctccatcagcactt
taccaatgccacacaaggagagtcaagaagttggctgttgaaaatggaaaccctaacgtg
gtatggagtgctagtgaagatgggaccttgaggcagcatgattttcgagagggaacatct
tgtccgccagcaggatcttcgcaccaagagtgtagaagtgttctactcgacttacggagt
ggagccaaaaggtcacttgctgatcctcctaaacaagttctagccctaaaatcttgtgat
atcagctcaactagaccacatctgctccttgttggcgggagtgatgcttttgctcgcttg
tatgatcggaggatgctaccacctttgagctcctgtcggaaaagaatgtcaccaccacct
tgtgtcaattatttctgtccaatgcatctttccgatcgtggacatccaagcttgcactta
actcatgttacatttggtcctgatggagatgaggttctccttagctatagtggagagcat
gtttacttgatgaatgttaatcatgctggattgaatgacatgcaatatacttcaggagat
gtatcaaaactaatgacatattctccaacaattaatggaatggaattgcaaccttctgta
tctagtgttttcccaaatggattttcaataaaaaagaatgttgctgcaaagattgactac
tgcaggaaactaataaaatacgctgaaaagaccttgaatgatggtccttattatggaatt
gaggcatgtaatgaagttttgaattgctacagccttactattgggcctgcactaaaatat
gaatgcctgtgtattcgagctgcactattgcttaagaggaagtggaaaaatgatgctcac
atggccataagggactgctgtgctgctaggaaaattgataactacgactacaaagcactt
tactatatgtcagatgcattgtcacagttaggaaggcacaaagaagcattggattttgct
gttgctgctcagctgttggccccatccatacctgaagttgcagaaagagtagagaaagct
aagaaggacatttcttcagccgaggcagagaaaaataacaagacaaatgatggaggatca
agattcgatagtcgaggtgggagaattttgtcattaagtgacatactctatcgttcggag
gctaacagtgatgcttcccaagatggtccaagatcagagagggatgactctgattatgat
gaggagttggagttggactttgaaacatcaatgtctggtgatgagggacatgatgttgag
tccaatattcttcatgggagtttaaaccttagaattcaccgaaggggtgactccagagaa
agcactggtgcgaatggcactgttgaatcaccttcgtcctcatcacagaatgacaaagct
tatcagtctgaagcagctattgacatgaatcaaagatttattggccattgcaatgttgga
actgatataaaacaggccagttttcttggtcaaagaggtgagtttgttgctagtggaagt
gatgatggcagatggtttatctgggaaaagggaactggtagactcataaaaatgctgaac
ggtgatgaatctgttgtaaattgtgtacaatgccatccatttgattttgttgtggcaaca
agtggaattgatagcacaataaagttatggactccaagtgcccctgttccatctgccgta
gctggtggtgcagcgggaccagagactgctgatgtattggttgctatggagagcaatcaa
caaaagttatcccgtggtcgtgattccattctgccctttgagcttttggagccatttaga
atgcatgagtttcccgaaggatccctgcgcctgcgtccttttgaatgtgcccagagctaa
DBGET
integrated database retrieval system
