Arachis hypogaea (peanut): 112706290
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Entry
112706290 CDS
T07294
Name
(RefSeq) uncharacterized protein isoform X1
KO
K06100
symplekin
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112706290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahf03021
]
112706290
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112706290
Transcription machinery [BR:
ahf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112706290
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
112706290
U7-dependent histone pre-mRNA processing factors
112706290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
112706290
NCBI-ProteinID:
XP_029144190
LinkDB
All DBs
Position
8:15663227..15681573
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AA seq
906 aa
AA seq
DB search
MIALIGALLAEGERGAESLEILVSKIHPDLLADIVITNMKHLPKTPPPLARIGNSPVPQQ
VGSQFSQSKVLAPSAPVSSIQSLAVTDQAPFSSTTITATSSSLSDINNLPADSKRDPRRD
PRRLDPRRIAATLGGAAGSVGDDIVATKLELDDPVSLIKPSSPPVASAEENNQSEATINL
KNEDIISEGPSLSGPDRLTPKTEVLERPGDTQHIAEAIASLDSSVIPSDATDEDRSTVKL
LEDTEANETDSLDFDQFSPDVQVASTSEDTCLELPQLPPYVDLTYEQETKVKHLAIRHII
ESYRHLDGTGCQQFCMPLLARLVAQIDDDNEFIVMLQNQIVEDHWQKGHELVLYVLYHLH
CLTVLDSVENSSSSSVLYEKFLLGVAKSLLESFPASDKSFSRLLGEVPLLPESALNILRD
LCCSDVVDHNGKIIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCAVHPQDEIRAKA
IRLVTNKLYQLSYIAEDVEKFATDTLLSAVDHDVSQSGPSEQRPEVEVACQEISGTSQVS
ESTLSEHDSDRTTKPMAQSLPSITFSEAQRLISLFFALCTKKPSLLQIVFDVYGRAPRMV
KQAFHRHIPILLRALGQSYTELLHIISDPPQGSENLLTLVLQILTQDSTPSLELISTVKR
LYETKFKDVSILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPV
EVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRT
VIQAIDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPPQL
ESALNRHANLRGPLASHANQPAVKSTIPRATLEVLGLASESHVQQHLPTSLHPSDTNSSV
QGATLT
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgattgctttgattggtgctttgcttgctgaaggagaaagaggtgctgaatctcttgaa
atccttgtttccaagattcatcctgatctgttggcggatattgtgataacaaatatgaag
cacttgcctaagacacccccaccgctagcaaggattgggaattcgccagtacctcaacaa
gttggttcccaattcagtcaatcaaaagttttagcaccatctgctcccgtaagttctatc
caatccttggctgttactgaccaagcaccattctcttcaactacaatcactgccactagt
tcatcactgtctgacatcaataatttgcctgctgattctaagcgcgacccacgcagggat
ccccgtcgcttggatccacggcgtatagctgcaactcttggtggagcagctgggtctgtt
ggagatgatattgtggcaacaaaattagagttagatgatcctgtatctttgattaagcct
tcttcacctcctgttgcctccgctgaagaaaataatcaatctgaggcaacaatcaatctg
aaaaatgaggatatcatttctgaaggtccctcactttctggacctgatcggctaactccc
aagacagaggttctggagaggcctggagatacccagcacattgcggaagcaattgcttct
ttggattcctcagtcattccctctgatgcaactgatgaagatcgtagtacagtgaagctg
ttggaggatactgaagcaaatgagaccgactcattagattttgatcagttttctcctgat
gtccaagttgcatctacatcagaagatacctgtctagaattaccacagctaccaccatat
gtggatctaacctatgagcaggaaactaaggtgaagcacctggctattaggcatattata
gagtcatacaggcatttggatgggacaggatgtcagcaattttgcatgccactccttgct
cggcttgtagctcagattgatgacgataatgagttcattgtgatgttgcaaaaccaaatt
gtggaagaccactggcaaaagggtcatgaactagtgctgtatgttttgtaccatctgcac
tgcctcacagtattggattcagttgaaaactcttcatcttcttctgtcttgtatgaaaag
tttctcttgggagtggccaaatctttgttggaatcttttccggcttcagacaaatctttt
agtaggcttcttggtgaagttccacttttgccagaatctgccttgaatattttgcgtgat
ctctgctgttctgacgttgttgatcataatggaaaaattattcgtgatatcgaacgtgta
actcaaggtctaggtgctatatggagtttaattttggggcgtccacaaaatcgccaagcg
tgcttgggcatagcattaaagtgtgctgttcacccacaagatgagattcgagcaaaagct
attcggctggtgacaaacaagctctatcagcttagttacattgcagaagatgttgagaaa
tttgccactgatactcttctttctgccgtagaccatgatgtttcgcaatctggaccctct
gaacagagacctgaggtagaggttgcatgtcaggaaataagtggcacatcacaggtctca
gagtctaccctttcagaacacgactctgatagaaccactaagccaatggctcaaagtctt
ccgtctataacattctctgaagctcaacgcttaatttctttatttttcgctttatgtaca
aagaaacctagtcttcttcagattgtatttgatgtctatgggcgagccccaaggatggtt
aagcaggcttttcatcgccacattcctattcttctgagggcattagggcaatcttatact
gaattgcttcatattatatctgatccaccacaaggaagtgaaaatcttttgacactggta
ctgcaaatattgactcaagattcaacaccatcattggaactgatatctactgtaaaacgt
ctatatgaaactaaatttaaggatgtttcaattctggttccactgctgtcatcactctcc
aaaaaggaggtgttaccaatattcccccgccttgttgacctaccattggagaagtttcag
agggcacttgctcacatactacagggatcggctcatacaggtccagcattaacgccggtt
gaagtgttggtcgcaatccatggaattgttcccgagaaagatggccttgcacttaagaag
ataacagatgcttgttcagcatgttttgagcagcgtacagtgttcacacaacaggttctg
gcaaaagcattgaaccagatggttgaccaaactccgttgcctctacttttcatgaggaca
gttattcaggcaattgacgctttccctgcattggttgattttgttatggagatactttca
aaacttgtgactaaacaggtgtggcgcatgccaaaactttgggttggttttttaaaatgc
gtataccagactcaaccgcgttcttttcatgtattattgcagttgccaccgccacaactg
gaaagtgctcttaacaggcatgctaacctcagaggtccccttgcttcccatgccaatcaa
ccagcagtaaaatctacaattcctagagcaactttagaagttctgggtcttgcaagtgaa
tctcacgtgcagcaacatttgccaacatcactgcacccatctgacacaaattcttcagtt
caaggagcaacactgacatga
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