Arachis hypogaea (peanut): 112706432
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Entry
112706432 CDS
T07294
Name
(RefSeq) WD repeat-containing protein ATCSA-1 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03420
Nucleotide excision repair
ahf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112706432
09124 Replication and repair
03420 Nucleotide excision repair
112706432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ahf04121
]
112706432
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112706432
Ubiquitin system [BR:
ahf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112706432
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
112706432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
112706432
NCBI-ProteinID:
XP_025613515
LinkDB
All DBs
Position
8:18010663..18015102
Genome browser
AA seq
452 aa
AA seq
DB search
MHTWKQIRDREFGNLRPHRFSNRIKSRHVSDLELSNHKDFLSPHKGALNSLQVDLTEGRY
LLSAAADASVAVFDVQRPTEYEAGGLISKHRCLFLVDKQHQLAHKYAVSSAVWYPVDTGL
FITGSFDHHINVWDTNTTQVVVNFKMPGKVYRTAMSPLATSHMLVAAATEDVQVRLCDVA
SGAFAHTLSGHRDGVMSVEWSTSSEWVLMTGGCDGAIRFWDIRRAGCFLVLDQSRTQLGR
RPSVLKRSITHKESSFKSSSAGQTTSAKVRVSQKKLPNGNGSRQVVIGRVPSKGSIKQRL
HPGMLSTQDRATAHYGAVTGLKVTDDGMYLLSSGSDSRLRLWDIESGCDTLVNFETVRLQ
TNKPIQLATSQDSTRVFVPCMRTVKAFDMWSGSTSATFRGHYECVNSCWFNEQDQELYTG
GNDRQILVWSPARLISDEMEEGIAEDQDSWSN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgtggaagcagatcagagacagggaatttggtaatttgcgcccacatcgtttc
tccaatcggatcaagtcccgccacgtctccgacctcgaattgtcaaaccacaaagacttt
ctctctcctcacaagggcgccctgaactcccttcaggttgatttgacagagggaagatac
ttgctatccgctgccgcagatgcctccgtcgccgtcttcgacgtgcagcgccccaccgag
tacgaagccggtggcctcatatccaagcaccgctgtctgtttctcgtggacaagcagcac
cagctggcgcacaagtatgctgtttcctccgccgtctggtaccctgtggacactggattg
ttcatcactggctccttcgatcaccacatcaatgtctgggacaccaacaccactcaggtt
gtggtgaatttcaagatgcctggcaaggtttatcggactgccatgtcccccttggccacc
tctcacatgctcgtcgccgccgccaccgaggatgtccaagtccgcctctgtgatgttgct
tctggtgcttttgctcacaccttgtccggccaccgtgatggagtaatgagtgttgaatgg
tctacttcaagtgaatgggtgttgatgactggaggatgcgatggtgcgatacgtttttgg
gatattagacgtgctggctgtttccttgttttagatcaatctcggactcagcttggaaga
cgcccatccgtacttaaacgctctatcacacacaaggagtcgagttttaagtcttcctcg
gctggccaaacaacaagtgcaaaagttcgcgtttcacaaaagaagcttcctaatgggaat
gggagcagacaggttgtgattggtagagttccatccaagggatcaataaagcagagatta
catccaggaatgctgtccactcaggatcgcgcaacagctcattatggtgctgtgacaggg
ttaaaagtaacagatgatggcatgtatctactaagctcagggtctgattcaagactaagg
ttgtgggatattgaatctggctgtgacacgctagtgaactttgaaaccgtacgcctgcaa
acaaataaaccaattcaattagccacctctcaggattcaacccgcgtttttgttccatgc
atgagaactgtgaaggcatttgacatgtggtctgggagcacgtctgcaacatttcgtggc
cactatgaatgcgtgaactcttgctggtttaatgaacaagatcaggaattatacactggt
gggaatgatagacaaattcttgtgtggtcacctgctaggttaatttcagatgaaatggaa
gaaggaattgctgaagatcaggacagctggagtaactga
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