Arachis hypogaea (peanut): 112707383
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Entry
112707383 CDS
T07294
Name
(RefSeq) protein PAT1 homolog
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112707383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112707383
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112707383
mRNA degradation factors
5'-3' decay
Decapping complex
112707383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
DUF2749
TFIIA
Motif
Other DBs
NCBI-GeneID:
112707383
NCBI-ProteinID:
XP_025614883
LinkDB
All DBs
Position
8:39151591..39158169
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AA seq
825 aa
AA seq
DB search
MVDMDVFGAGGNLGGAPTTEDLRQLGGASSENAVFDASQYDFFGKDFVEEVELGGLEDED
GELPPVGFDEEEEIFFNREEGDDLRSTSEVDDLTTTFSKLNKDVSGSSAGLIGEHGSREN
SSAAERAHRDDIYNWYDQHDYDSEGGQDLKRWSSQPHNSLALLQESKGLLYRTSSYPDQQ
QHQHFSSEPIMVPKSSFSSYPHFGGMQQQDSPNQSMGHLNIPFHAGGSQMPMSSPNQSHL
PNSQIPLAGLSHGSHFGGNLHQFPSGSPVNNRMPNQWLNQGELYSGDPPNILNNLLQQQL
PLHNGSIRPHLVTQMQQQQQEQQQRMRPPQPSTGYLPGLQSHLFNPSISSGLPFDQMAGL
MELRDQIPKSAQRGRQNFRFPPQGFDISNMKSNIGWPRFRSKHMSTEEIENILRVQLAAT
HSNDPYVDDYYNQACLAKRSAGAKLRHHFCPNQIRELPLRASTNTEQHAFLQVDALGRVP
FSSIRRPRPLLEVDPPNSSPAGGNEQNISEKPLEKEPMLAARVTIEDGLCLLLDVDDIDR
FLQFNQLQDGGIQLKRKRQSLLEGLAASLQLVDPLGKTGHTVGLAAKDDLVFLRIVSLPK
GRKLLAKYLQLLFPGGELMRIVCMAIFRHLRFLFGGLPSDPVAAETVSNLARVVSKCIRE
MDLGALSACLAAVVCSSEQPPLRPLGSPAGDGASLVLVSVLEKATELLTDPHAASHYNIA
NRSLWQASFDEFFGLLTKYCVTKYDSVMQSLLVQGIPNMGGIGSDAARAISREMPVELLR
ASLPHTDDRQKKLLLDFAQRSMPVVGFNSNGGGNGGHVNSESVLS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggtggatatggatgtgtttggagctgggggtaatcttggaggagctcctaccacagag
gatcttaggcaattagggggtgcttcctcagaaaatgcagtatttgatgcatcacaatat
gacttttttggaaaagattttgttgaggaagtggagttggggggtttagaagatgaagat
ggtgaattgcctcctgttggatttgatgaagaggaggagatttttttcaatagagaagag
ggtgacgatttaagatctacttcagaggttgacgatctcacaacaacattttcaaagttg
aacaaggatgttagtgggtcaagtgctggactcattggtgaacatggatcaagagaaaat
tcatctgctgctgaacgggcacatagggatgatatttataattggtatgatcagcatgat
tatgacagtgaaggtggtcaggatctcaaaagatggtcatcacaaccacataattcattg
gctctgttacaagagtctaagggcttgttgtatagaacatcctcatatcctgatcagcag
caacatcaacatttttctagtgaaccaattatggtgccaaaatcttctttttcttcttat
cctcactttggtggcatgcaacaacaagattccccaaatcagagcatgggccatctgaat
atcccatttcatgctggtgggtcacagatgccaatgtcttcacctaatcaatctcatttg
cctaactcccagatcccattggctggcctttcccatgggtctcattttggtgggaatttg
catcagtttcctagtggatctcctgttaataatcgaatgccgaatcaatggctcaaccaa
ggtgaattatattctggagatcctcccaacattctgaacaatttattgcagcagcaatta
cctcttcataatggatcaatacgtcctcacttagtgactcagatgcagcagcagcaacag
gaacagcagcagaggatgcgtccccctcagccttcaacaggatatttacctggtttgcag
tcccatttatttaaccctagtatttcctcaggtttaccctttgatcagatggctgggcta
atggaactaagggatcaaataccaaaatcagctcaaagaggtagacagaactttcggttc
ccccctcagggttttgatataagtaacatgaagagtaatatcggatggcctcgatttagg
tctaagcatatgtcaactgaggaaattgagaatattctgagagtgcagcttgcagcaact
catagtaatgatccatatgtagatgattattacaaccaagcctgtcttgcgaaaagatca
gcaggtgctaagctgaggcatcacttttgtccaaatcaaataagggaactccctctgcga
gcctctactaatactgaacaacatgcatttcttcaggttgatgctctaggaagggttcct
ttctcatcaatccggaggccccgtcctcttctagaagttgatcctccaaattcctctcca
gctggtggcaatgagcaaaatatatcagagaagccccttgaaaaggagccaatgcttgca
gcaagggtcacaattgaggatggtctttgtcttcttcttgatgtagatgatattgatcgt
ttcctacagtttaatcagcttcaggatggtggaattcagttaaaacggaagcggcagagt
cttctggaaggacttgcagcatcacttcagttagttgatccactgggaaagactggacat
acagttgggcttgctgcaaaagatgaccttgtgtttctcaggatagtttctctacccaag
ggtcggaagcttcttgctaagtatcttcagctgctttttccaggtggtgagctaatgcga
attgtgtgcatggcaatctttcgtcatttgagattcttatttggtggtcttccctcagat
ccagttgctgcagaaactgtaagtaaccttgcaagggttgtttcaaagtgcatccgtgaa
atggatcttggtgcactaagtgcttgtctagcagcagttgtttgttcttctgagcagcct
cctctacgtccacttggaagccctgctggagatggggcttcccttgttttggtgtctgtg
cttgagaaggcaactgaacttctgactgatcctcatgctgctagccattataatattgca
aatcgttccctttggcaggcttcatttgatgaattctttggccttctgaccaagtattgt
gtgaccaaatatgacagtgtcatgcaatcattgcttgttcaaggtataccaaatatgggt
ggtattggctcagatgctgccagagctattagtagggaaatgccagttgagctcttacgg
gccagtctaccccacactgatgatcgccagaaaaagctattgcttgattttgctcagcgc
tctatgcccgtagttggattcaacagtaatggtggcggtaatggtggccatgtgaactcg
gagtcagtgctgagttga
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