Arachis hypogaea (peanut): 112707548
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Entry
112707548 CDS
T07294
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112707548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112707548
03009 Ribosome biogenesis [BR:
ahf03009
]
112707548
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112707548
Spliceosome [BR:
ahf03041
]
Complex A
U1 snRNP components
U1 related factors
112707548
Complex B
112707548
Ribosome biogenesis [BR:
ahf03009
]
Eukaryotic type
Pre-60S particles
Helicases
112707548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
112707548
NCBI-ProteinID:
XP_025615098
LinkDB
All DBs
Position
1:106370408..106376746
Genome browser
AA seq
1177 aa
AA seq
DB search
MAAAEAAQAAAGPRYAPDDPTLPTPWKGLIDGSTGLLYYWNPETNVTQYEKPPPLPSGPA
PAASTPNMAPIPVAHAMQSGGMMGQHGQQMLQSSQQQGSNLAQQHGQMMPQQQSSHVASQ
QKPSPVAQGVQQQNLQLAQSMPQPGFNQAGQHSLPHQGQHSMQPQGQYPMQPQGQQMVQP
KGQQMTQQPHQMHYQMQPQGINAQHFGQGASQAQGSHSVQPQAHQFAPQNMHYMPYQPNM
PQPVQPSSQHNMHGHSYENQQDFKSAFPKIEEPEFKNENQVGVSPSNYQQTNQNIPAGVR
SGPSGQVPDGGANAGHSKQFGGAPGSIQQSPSAVPLQQGSSYPVYQHGPSFQNQMGPGMM
HGHPPNVHPGSQKMGHADNFHGRAGNEYYYNSSKEMPAMGPQQPNIAPIPISTKQQDMRM
GSSPFQNVMPSGNGSGIPGHPMHMFPPVGGHPPLSSNSLKGPPYMGSTDVTDMTPAEIYC
QQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAI
AKTGSGKTLGYLMPAFILLRQRRNNPLNGPTVLVLAPTRELATQIQDEAVKFGRSSRFSC
TCLYGGAPKAQQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGF
EPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKAITQYV
EFVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSIGRNYGAAAIHGDKSQSER
DWVLNQFRSGKSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGV
SYTFFSEQDWKHASDLIKVLEGANQHVPPELRQMTLRGPPNFGKERGGMSRFDSGGGGRW
DNGGRGGMRDGGFGGRGGMRDGGFSGRGGMRDGNFGGRGGMRESGFSNDGGMRDGGFGAH
GASGQGGRGDMFGGRGNRGRGFGGPRGGHAGWGRGDRGPNDRFNMDGRGRGRGRGRLDNR
RDVGYRSRGRSRSRSPERVRTWDYSSRSRSRSRSSRSWSRSRSRSRSRSRSWSRGRSRSR
SYSPSPRRSRSRSRSGRSYSRSRSRSPRRSPSYDRRDRTDQHHSDQKDYREPEVQAPNPG
VSPSSQGQQNSILGTDQVDQAPLVAGSGDPEDPNALA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcagaggcagctcaagctgccgctggtccacggtatgcacctgatgatccc
acccttcctacgccatggaaggggctaattgatggaagcactggtcttttgtactactgg
aaccctgaaactaatgtcacccagtatgagaaacctccccctttgccgtcgggccctgct
ccggctgcttctacacccaacatggcgcccatacccgtggctcatgcgatgcaatctggt
gggatgatggggcagcatgggcagcaaatgcttcagtcctctcaacagcaagggagtaac
cttgctcagcaacatgggcaaatgatgccacaacagcagagttcgcatgtggcatctcag
cagaagccatctccggttgcacaaggggtgcaacagcagaatttgcagttggcacagtcc
atgccacaaccagggtttaatcaggctggacagcattcattgccgcatcagggacagcat
tcaatgcagcctcagggacagtatcccatgcaaccccaagggcaacaaatggtccagcct
aaagggcagcagatgacacaacaaccacatcagatgcattatcagatgcagccccaaggt
atcaatgcccaacattttggtcaaggagcatctcaggctcagggctcacattctgtgcaa
ccacaagcacatcaattcgccccccagaacatgcattatatgccatatcagccaaacatg
cctcaacctgtgcagccaagttcccagcataacatgcatggtcattcttatgaaaaccaa
caagacttcaaatcagcattcccaaagatagaggaaccagagtttaaaaatgaaaaccag
gttggagtttcgccatctaactatcaacaaaccaatcagaacattcctgctggagttaga
tccggaccatctgggcaagtgccagatggaggtgcaaatgctggtcactcaaaacagttt
ggtggcgcaccaggaagcatacaacagtctccctctgcagtgccattacaacagggtagt
tcttatccagtttaccaacatggtcctagctttcaaaaccagatggggcctggtatgatg
catggtcatccacccaatgtccatcctggaagccagaagatgggacatgcagataatttt
catggtagagctgggaatgaatattactataactctagcaaagagatgccagctatgggt
cctcagcagccaaatattgcaccaatacccatttcaacaaagcagcaggatatgagaatg
ggcagcagcccttttcaaaatgtaatgcctagtggaaatggaagtggtatcccaggtcat
ccaatgcacatgtttccaccagtaggagggcatccgcctctctcaagtaactccttgaaa
ggacctccttatatgggatctacagatgttactgatatgacacctgctgaaatttattgt
cagcaacatgaagttacagcaacgggtgacaacattccacctccttttatgacatttgat
gctactggatttcctccagagattttgagagagatatattctgctggcttctcaaaccca
acaccaattcaggctcaaacttggccagtagcactgcaaggtagggacatagtggcaatt
gcaaaaacaggctctggcaaaacattgggctacttaatgcctgcattcatccttcttagg
cagagaaggaataatcctttgaatggccccactgtcttggttttagctccaacacgtgaa
cttgctacacagatccaagatgaggctgtcaaatttggaagatcttcacgtttctcttgc
acgtgtttgtatggtggagcacccaaagcccaacagctaaaagagttagatcggggagca
gacattgttgttgccacacctggccgactcaatgacatccttgaaatgaagaaaattgac
tttgggcaagtttcactgcttgtgcttgatgaggctgaccgtatgcttgacatgggtttt
gaacctcaaatccggaaaattgttaatgagattccaccacgtaggcaaactctcatgtat
acggcaacatggccaaaagaagtaagaaaaattgccagtgacctgctcgttaatcctgtt
caggttaacattggaagtgttgatgagcttgccgcaaataaagctatcacacagtatgtt
gaatttgtccctcaaatggagaagcagaggcgattagagcagatcctcagatcccaagag
cggggctctaaggttattatattttgttccacaaagaggttatgtgatcagcttgcccgt
agtattggtcgcaattatggggctgctgcaattcatggtgacaagtctcaaagtgagagg
gattgggttttaaatcagttccggagtgggaagtccccagttttagttgccactgatgtt
gctgctcgtgggcttgacatcaaggatataagggtggttataaactatgatttccctact
ggagttgaggattatgtacaccgaattggaagaactggacgggcaggtgctactggagta
tcgtacacctttttctcggagcaggactggaaacatgcatctgatttaatcaaagtcttg
gagggtgcaaaccagcatgtgcctccagagctaagacagatgaccttgcgcggaccacca
aactttggaaaagagcggggtgggatgagtcgtttcgactctggtggtggtgggcgttgg
gataatggtggtcgtggtggcatgagggatgggggctttggtggtcgtggtggcatgaga
gatggtggctttagtggtcggggcggcatgagggatggtaactttggtggccgaggtggc
atgagggagagtggattcagcaatgatggtggcatgagagatggtggctttggtgctcat
ggtgctagcggtcaaggtgggagaggtgatatgtttggtggtaggggaaatagaggtcga
ggatttggtggccctcgtggtggtcatgctgggtggggtagaggggatcgtggtccaaat
gaccgattcaacatggatggaagaggaagagggcgaggacgtgggcgattagacaacaga
agagatgttggatacaggagtagaggcagaagccgtagccgtagcccagagagagtacga
acatgggactatagtagcagaagtcgtagtaggagtcgcagcagtaggagctggagccgg
agccggagccgaagccgaagcagaagccgcagttggtcgcgtggtcgcagtcggagtcgc
agctatagccctagccctcgtcggagtcgaagccgcagtcgtagcggtcgcagttacagc
cgcagccgcagccgaagtccccgtagaagtcccagctatgataggcgtgataggacagat
caacaccattctgatcaaaaggattatagagaaccagaggtccaagctcccaatccggga
gtgtctccaagctcccaagggcagcagaattcaattttgggaactgatcaagtggatcag
gcgccactggttgctgggagcggtgacccagaagatcccaatgctctggcatag
DBGET
integrated database retrieval system
