Arachis hypogaea (peanut): 112709423
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Entry
112709423 CDS
T07294
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03020
RNA polymerase
ahf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112709423
09124 Replication and repair
03420 Nucleotide excision repair
112709423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahf03021
]
112709423
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112709423
Enzymes [BR:
ahf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112709423
Transcription machinery [BR:
ahf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
112709423
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
112709423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
112709423
NCBI-ProteinID:
XP_072058001
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Position
9:complement(104973346..104980286)
Genome browser
AA seq
1731 aa
AA seq
DB search
MDIRFPYSPAETANVRTVQFGILSPDEIRRNSVVEIEHGKSSEKGKPKVGGLSDPRLGTV
DRKIRCATCTADMAECPGHFGHLELAKPMFHVGFLKTVLTVMRCVCFNCSKILAREQDKK
FEQALKIGNAKNRLKRILDACKNISNCQGGEDSEELVRIGCGALQPKITIDGIKMIAEYK
ARRNKNNDHEQLPNPEERKEILSAERVLGVLKRISDEDCELLGLNPQFARPDWMILQVLP
IPPPPVRPSVMMHSSCRCEESDDLTHQLATIIKHNENLKRHAKNRSPQHIVSQFSLLLQF
HITAYFDNELKGLPRATQRTGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPN
INIDELGVPWSIALNLSHPETVTPYNIERLKELVEYGPNPPPGKTGAKYIIRDDGQRLDL
RYLKKSCHPHLEIGYKVERHLMDGDLVLLNRQPSLHKMSIMGHRIKIMPYSTFRLNLSAT
KPYNADFDGDEMNMHVPQSFETRAELLELMMVPKCIVSPQSNRPVMDIVQDTLLGCRKIT
KRDTFITKDVFMNILMWWEDFDGNVPTPAILKPEPLWTGKQVFNLIIPKQINLTRYSSWH
DDNEGGSSITPGDTMVRIEKGELLTGTLCKKTLGASTGSLIHVIWEDAGPDAARKFLGHT
QWLVNYWLLQNSFSIGIGDSIADASTMEVINQTISEAKEKVKTLFRDAQEKKLESEPGQT
MMDTFEKKVNEVLNEARNDAGKKAQTSLSESNNLKAMVTAGSKGSFINISQMTACLGQQN
VEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGVIDTAV
KTSETGYIQRRLVKAMEDIMVKYDGTVRNSVGDVIQFLYGEDGMDAVWIETQNLDSLKMK
KSDFDRTFKYEFDKENWNPSYMLEGPIEDLKSSIELRNLLEDEFEMLEHDRHLLANEIAT
TGTSSLPLPVNLKRLIRNAQKTFKIDFRRPSDMDPIEIVEAVDKLQERLKVVPGDDLLSQ
EAQKNATVLFNILLRSTLSSKRVLQEYKLSREAFEWLVGEIESRFQQSLVTAGEMIGCVA
AQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLTEIINVAKRIKTPSLSVYLKPEVSRTS
EEAKRVQCDLELTTLRRVTQATEVWYDPDPLYTVIEEDVDFVKLYNEMPDEEVALERMSP
WLLRIELNREMMVDKKLSMADIAEEIKHVFDDDLKCIFNDDNAEKLILRIRIMNDEAHRG
EIQDDSADDVFLKRIESSMLTEMTLRGIPGISKVFMKSIDVPKFDDNEGFQTHKEWMLET
DGVNLLAAMCHEQVDATRSISNHLIEIIEVLGIEAVRRALLNELRAVISFDGSYVNYRHL
AILCDTMTYRGHLMSITRHGINQNDTGPMMRCSFEQTVDILLDAAAYAEADHLRGVSENI
MLGQLAPLGTGQCSLYLNDEMIKNAFDLQLPSYMDGLDFGKTPAHFSMSTPYLDGLMSPT
HLSSPNLRPSPINNAVFSPYGMACGYSAYRSDYSISSPAYDPVSPKYTPTSPVYSPVSPS
YSPLSPTYTPTSPAYSPISPAYSPSSPGYSPTSPSYSPISPTYSPSSPWYSPTSPSYSPI
SPTYSPSSPWYSPTSPSYSPISPIYSPSSPGYSPTSPSYSPTSPYYSRLSAEYSPTSPYY
SPSSPTYSPSSPKFSPSSPDFSLTSPQFSASMEYSPSRHGYSPSSTSQYTP
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atggatattaggtttccttattcgccggcggaaactgcaaatgtacgtacggttcagttc
ggaattctcagccccgacgaaatcaggagaaactctgtggtggaaatcgagcacgggaag
agctcggagaaggggaagccaaaggtcggagggttgagcgaccctcgccttggaaccgtt
gataggaagattcggtgtgccacgtgtacggctgatatggctgagtgcccggggcatttc
ggtcacttggagctcgctaagccaatgtttcacgttggtttcttgaagacggtgctcacc
gtcatgcgttgtgtttgcttcaactgttccaagattttggcgcgcgagcaggataagaag
tttgaacaagctttgaagattgggaacgctaaaaacaggctgaagaggatcttggatgct
tgcaaaaacataagcaattgtcaaggtggtgaagattctgaggagctggttcgaattggc
tgcggtgccttgcagcccaagattactattgacggtataaagatgattgctgagtataag
gctcggaggaacaaaaacaatgaccatgaacagcttcctaatcctgaagaaaggaaagag
attctttctgcagaaagggttcttggtgttctaaaaaggataagcgacgaggactgcgaa
ttgttgggcttgaatccgcagtttgcgcgtcctgattggatgatcttgcaagttcttcca
attcctcctccaccagtgagaccttctgttatgatgcactcatcttgtaggtgtgaggaa
agtgatgacttgactcatcagttagccacaatcatcaagcacaatgaaaatttgaagaga
catgcgaaaaatagatcacctcagcatattgtttcccagttttctctgttgttgcagttc
catataaccgcatattttgataacgagttgaagggactgccaagagctactcaaagaaca
ggaaggcctatcaaatcaatttgtagcaggcttaaagccaaagaaggtcggattagagga
aatttgatggggaaaagagttgatttttctgctcgaacggttattacaccagacccgaac
attaacattgatgaacttggagtgccatggagtattgctttgaacctttcacaccctgag
actgtaactccatataatattgaaaggttgaaggagcttgtagagtatggacccaatccc
ccacctgggaaaactggtgccaagtacatcattcgcgatgatgggcaaaggcttgatctc
agatatttgaagaaaagttgccatcctcatttggagataggatacaaggtggagcgccat
ttgatggacggagacttagttctcttgaatcgtcagcctagtcttcataaaatgtccatt
atggggcacagaatcaaaatcatgccttattctacgtttcggcttaatttgtcggcaact
aagccttataatgctgattttgatggggatgaaatgaacatgcatgttcctcagtcattt
gaaaccagagcagagttgttggagctcatgatggtgcctaaatgcattgtatctcctcaa
tcaaacagaccagtaatggatattgttcaagacacactattaggatgcagaaaaatcacc
aagagagataccttcatcacaaaggatgtatttatgaacattctaatgtggtgggaagat
ttcgacgggaatgttcctacaccagcaatattgaagccagaaccattgtggactgggaaa
caagttttcaatcttattattcccaagcaaataaatttaactaggtattctagctggcat
gatgataacgaaggaggatcatcaataactccaggggatactatggtcagaattgaaaaa
ggggaactacttaccggaactctttgcaaaaagacacttggagcatctactggaagtctc
attcatgtcatttgggaagacgctggccccgatgcagctcgtaaatttcttggccacact
cagtggcttgtaaactactggcttctgcagaattcttttagcattggaattggtgattcg
attgcggacgcttcgactatggaggttattaaccagactatttcagaggcaaaagagaaa
gtgaaaacactatttagggatgctcaagaaaagaagttggagtctgaacccggtcagaca
atgatggatacatttgagaagaaagtgaatgaggtgctgaacgaagctcgtaatgatgcc
gggaaaaaagcgcagacaagtttatctgagagcaataatctgaaagcaatggtgacagct
ggttccaaaggaagttttatcaacatatctcagatgactgcttgtcttggtcaacagaat
gttgaaggcaagcgaattccatttgggttcatagataggacactgccacactttacaaaa
gatgattatgggcctgaaagccgaggctttgtggagaactcgtatcttcgagggctgacc
ccacaagagttctttttccatgccatgggaggtagggaaggtgttattgatactgcagtg
aagacctctgaaactggatacatccaaaggcggcttgtgaaggctatggaggatattatg
gtcaaatacgatggaactgttaggaactccgtaggagatgtcatacaatttctctatgga
gaagatggtatggatgctgtttggattgaaacacagaatcttgattccctgaaaatgaaa
aagtcagactttgataggacctttaagtatgagtttgataaggagaactggaatcctagt
tacatgcttgaagggcctattgaagacttgaaatccagcatagagcttcgtaatttactt
gaggatgaatttgaaatgcttgaacatgatagacatctgcttgcaaatgagattgccact
actggtactagttctcttccactgcctgttaaccttaagaggcttatcaggaatgctcag
aagacatttaagattgactttcgaaggccttctgatatggacccgattgaaattgtagaa
gctgttgataagctacaggagagacttaaagttgttcctggtgatgatctccttagtcaa
gaagctcagaagaatgctactgtcctgttcaatatccttcttcgcagcactctttccagt
aaaagggtcttgcaggaatataagctttcccgcgaagcatttgaatggttagtgggagag
atagaatcaagattccagcagtcactagtaactgcgggggaaatgattggttgtgtggcg
gcacaatctattggggagccggctactcagatgactctcaacacattccactatgctggt
gtaagtgctaagaatgttacacttggtgttcccaggttaacagaaattattaatgtggcc
aagagaatcaaaacaccttccttgtctgtgtatttgaaacctgaggttagtaggacttca
gaggaggccaaacgtgtgcagtgtgatttagagcttactacacttaggagagtgacacaa
gctacagaggtgtggtatgatccagacccattgtatactgtaattgaagaagatgttgat
tttgtgaagttgtacaatgaaatgcctgatgaagaagttgctcttgaaagaatgtcacct
tggttgcttcgcatagaattgaaccgagagatgatggtggataagaagttgagcatggct
gacattgctgaggagataaaacatgtgtttgatgatgatttgaaatgtattttcaatgat
gacaatgctgaaaagctcatacttcgtatccgaatcatgaatgatgaagcccaccgggga
gagattcaggatgattctgctgatgatgttttcttaaagagaatagaaagcagcatgctt
actgagatgacattacgtggcatccctggcatcagcaaagtatttatgaaaagtattgac
gttccaaaatttgatgacaatgaaggttttcagactcataaggaatggatgcttgaaact
gatggtgtcaaccttttagctgcaatgtgccatgagcaagttgatgcaacaaggagcata
agcaaccaccttattgaaattattgaagtccttggaattgaggcagttcggcgggctctt
ctgaatgaattgcgtgctgtcatctcttttgatggatcttatgtcaattacaggcatctc
gctattctttgtgatactatgacttatcgtggtcatttgatgtcaattacgcgccatggt
atcaaccaaaatgataccggtccaatgatgagatgctcatttgaacagactgttgatatt
ctccttgatgctgcagcatatgctgaggctgatcacttaaggggtgtcagcgaaaacatc
atgttaggccagcttgcgccccttggcactggacaatgctctctgtatcttaatgatgag
atgattaagaatgcatttgatctccagctacctagttatatggatggtcttgactttggc
aagacacctgctcatttctccatgtcaactccctatcttgatggcttgatgtcaccaact
catttgtccagtccaaatctgcggccatcaccaattaataatgcagttttttcaccttat
ggaatggcctgtggttacagcgcatatcgaagtgactacagtatatcttcacctgcttat
gatccagtttcacctaagtacactcccacttctcctgtatatagccctgtgtcaccaagt
tatagtcctctttccccaacttataccccgacgtctccggcatatagtcctatatcacct
gcatatagcccctcctctcctgggtacagccctacatcaccaagctatagtcctatatca
cctacatatagcccctcctctccttggtacagccctacatcaccaagctatagtcccata
tcacctacatatagcccctcctctccttggtacagccctacatcaccaagctatagtcct
atatcacctatatatagcccctcctctcctgggtacagccctacatcaccaagctatagt
cctacttccccttattacagtcggttatctgcagagtatagtcccacatcaccatactat
agcccctcatcaccaacttattctccatccagcccaaaatttagtccaagcagtccggat
ttcagcctaacttctccacagttcagtgcttcaatggaatactcgccaagtcgacatggt
tactcaccgtcatcaaccagccaatacactccatag
DBGET
integrated database retrieval system
