Arachis hypogaea (peanut): 112712023
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Entry
112712023 CDS
T07294
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112712023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112712023
03012 Translation factors [BR:
ahf03012
]
112712023
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112712023
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112712023
Translation factors [BR:
ahf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112712023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
AAA_11
Dicer_dimer
ATPase
ATPase_2
AAA_23
NPHP3_N
TsaE
Motif
Other DBs
NCBI-GeneID:
112712023
NCBI-ProteinID:
XP_025620582
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All DBs
Position
9:112849645..112859077
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AA seq
1200 aa
AA seq
DB search
MPFIILSSSQPSLLTAKALKPSIHAMKDRPTLSSYGAIYVPPHHRLRSVITSANYNSSAP
SVAKLRDHRGAALNPRPVASAAPTTVHRSQTTLPEQIPDKGNSRFVSAYDDVVSEEGSDR
EFEAPSFRSASPNDNVDEWKRKLTLLLNDKSKQELLSREKKDRRDFDQIALLASRMGLYS
HMYAKVVVFSKVPLPNYRYDLDDRRPQREVSMPITLLRRVDAYFEEHLTRKSKMKESFSD
VSFTRSSSNSSIGTDEGLFEHPEPLASSKAVGEKILRRRSLQMHDQQQAWQESPEGRRML
EFRRSLPAYKEKEAILSLLSRNQVVVISGETGCGKTTQIPQFILESEIESVRGAACNIIC
TQPRRISAMSVSERVAYERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRN
LTGVTHVIVDEIHERGMNEDFLLIVLKDLLPHRPEMKLILMSATLDSELFSSYFNGAPVM
NIPGFTYPVRTHFLEDILEMTGYRLTTSNQIDDYGQERMWKMNKQVPRKRKSQIAYVVED
AIRAADFKDYSPQTQESLLCWNPDCIGFSLIEYILCMICENERPGAVLVFMTGWDDISTL
KEKFLAHPVLGDPNRVLLLTCHGSMGSSEQRLIFEEPKDGVRKIVLATNIAETSITINDV
VFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRRGRAGRVQPGVCYHIYPRCVYDAF
AEYQLPEILRTPLQSLCLQIKSLRLGSIPEFLSRALQSPEILAVQNAIEYLKIIGALDEN
ENLTTLGSYLTMLPMEPKLGKMLILGAIFNCLDPILTVAAGLSVRDPFLTPLDKKDLAEA
AKSQFAGAYSDHLALIKAYEGWKDAELDMGGCEYCWKNFLSAQSMKAIDALRREFRCLLK
DIGLVDSNTANCNLWSCDVNLIRAVICYGLYPGICAVVHNEKSFSLKTMEDGQVLLYSNS
VNARETRIPYPWLLFNEKIKVNSVFLRDSTAVPDAVVLLFGGNLLKGDADGHLKMLGGYL
EFFMEPPVADLYQCVKRELDDLIQRKLLFPKMSIHLYDELLSAVRLLISIDTCEGKFVFG
RRVFKPAKSTVMATSHPASISRTESGPGGDNSKSQLQTLLTRAGYAAPSYKTKQLKNNQF
RATVEFNGMQIMGQPCSNKKSAEKDAAAEALQWLMGGKQSGSEYISHMSKLLKKSKKDHS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcattattctctcttcttcacaaccttctttgttgaccgccaaagccctaaaa
ccttcgattcacgccatgaaggaccgccctacgctgtcctcttatggcgccatttacgtt
cccccgcaccaccgcctccgctccgtcatcacttccgccaattacaactcctccgctccc
tctgtagccaagctccgcgatcaccgtggtgcagctctaaaccctagacccgttgcttca
gctgctcctaccactgtgcatcgctcgcaaacgacgttgccggagcaaattcctgacaag
gggaattcgcgctttgtttcagcttacgacgacgtggtttccgaggaaggctccgatcgt
gaattcgaggctccctcatttcggagtgcttcaccaaatgataatgttgatgagtggaag
aggaagctaaccttgctcttaaacgacaagagtaagcaagagttgttgtccagggagaaa
aaggataggcgtgattttgatcaaattgcgcttttggcaagcagaatggggttgtatagc
cacatgtatgcaaaggttgttgtcttcagtaaggttccacttccaaactatagatatgac
ttggatgataggcggccgcagagggaggtgagcatgcctataactttgttaaggcgagtt
gatgcatactttgaggaacaccttacccgaaagtccaagatgaaggaaagcttttcagat
gtatcatttacaagatcaagcagtaacagtagtattggtacagatgaagggctttttgag
caccctgagccacttgcatctagtaaggctgttggggagaaaatacttaggcggaggagc
ttgcaaatgcatgatcagcagcaagcatggcaggaatctccagaaggaagaagaatgcta
gaatttcgcaggagtctccctgcttataaagagaaagaagcaatattgtctctcttatca
agaaatcaggtagttgtcatctcaggcgaaacaggttgtggcaagacaactcaaattcca
cagtttattttagaatctgagatagaatcagttcgaggagctgcttgtaatatcatatgc
acacaaccaagacgcatatcagctatgtctgtttctgaaagggttgcctacgagagaggg
gagaaattgggtgaatctgttggatataaagttcgattggagggtatgaaggggagagat
acccatcttctcttttgcaccacgggcatcttattaagaagattgctagctgatagaaac
ttaacaggtgtaactcatgttatcgtggatgaaattcatgagcgtggcatgaatgaagat
tttctgcttatcgtccttaaagatctccttccgcaccgacctgaaatgaaactgattttg
atgagtgctaccctagattcagagctcttctcttcttactttaatggggcaccagttatg
aatattccgggcttcacatatcccgttagaactcattttttggaggacattcttgaaatg
acgggctacagattgacaacttctaatcaaattgatgattatggtcaagaaaggatgtgg
aaaatgaacaaacaggtcccaagaaagaggaaaagccaaattgcttatgttgtcgaggat
gctattagagctgctgatttcaaagattacagcccacagacacaggagtctttgttgtgt
tggaatcctgattgtattggatttagtctcatagaatatatcctatgcatgatatgtgag
aatgaaaggcctggtgctgttttagtttttatgactggatgggatgatataagcactttg
aaagagaagtttttggctcatcctgtcttaggagatccaaatcgagttttgttgcttacc
tgtcatggctcaatgggcagttcagaacagaggttaatatttgaagaacccaaagatgga
gtaagaaaaatagtgcttgcaacaaatatcgctgaaacgagtatcacaataaatgacgtt
gtttttgtgcttgactgcggaaaagcaaaagaaacatcatatgatgcactgaataacacg
ccctgtttgcttccaacatggatctctaaggtttctgcccaacagagacgaggaagagct
ggtcgtgttcaacctggagtgtgttaccatatctatcctagatgtgtatatgatgcattt
gctgagtatcaattgccagaaattttgaggacacccttgcaatctctgtgtctgcaaata
aaaagtctaagacttggaagcatacctgagttcttgtctagggctttgcagtctccggag
atccttgcggtacaaaatgctattgagtatttgaaaataattggggctttggatgagaat
gagaatttgactactctagggtcctatctgacaatgcttcccatggaacccaaacttggc
aagatgcttatattaggggctatcttcaattgcctggatccaatattaactgtggctgct
ggtcttagtgtgagagatcctttcctaacaccactggacaaaaaagaccttgcagaggca
gcaaaatctcagtttgctggagcatatagtgaccaccttgcacttataaaggcttacgag
ggttggaaagatgcagaattagacatgggaggatgtgaatattgctggaaaaattttctt
tcagcacaatcaatgaaagctattgatgctcttaggagagagttcagatgcctgctcaag
gatattggattagttgatagcaatacagccaactgcaacttgtggagctgtgatgtgaat
cttatccgggcagttatttgctatggtctatatcctggaatttgcgctgttgtgcacaat
gaaaagtcattctctttgaaaacaatggaggatggtcaagtgctcctatattcgaactcc
gtcaatgctcgggaaactagaattccatatccatggttactttttaatgagaagataaaa
gtgaactctgttttcctccgcgactcaacagctgtgcctgatgcagtggtgcttctgttt
ggtggaaacttattgaaaggggatgctgatggccacctaaaaatgttgggaggatatctg
gagttcttcatggaacctcctgttgctgatctgtaccagtgtgtaaagagagaacttgat
gacttaattcaaagaaaactactttttccaaagatgagcatacacttgtatgatgaactc
ctatcagcagtgcggttgctgatttccatagacacatgtgaaggcaaatttgtatttggt
cgtcgggtctttaaaccagcaaagtcaacagtgatggccacatcacatccagcatcgatt
tcaaggactgagagtggccctgggggtgataattctaaaagtcagctccagaccttactc
acaagagcaggatatgctgcacccagctacaagactaaacaattgaagaataatcagttt
cgggctacagttgagttcaatggaatgcagataatgggccaaccctgtagcaataagaaa
agtgcagaaaaagatgctgcagctgaggccttgcagtggctgatgggtggaaaacagtca
ggcagtgagtatatcagtcacatgtccaagttgctaaagaaaagtaagaaggatcacagc
tga
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