Arachis hypogaea (peanut): 112715627
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Entry
112715627 CDS
T07294
Name
(RefSeq) polyadenylate-binding protein 2
KO
K13126
polyadenylate-binding protein
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112715627
09123 Folding, sorting and degradation
03018 RNA degradation
112715627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112715627
03041 Spliceosome [BR:
ahf03041
]
112715627
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112715627
mRNA cycle factors
Stress granule specific factors
112715627
Spliceosome [BR:
ahf03041
]
Complex C
Other components
Complex C specific factors
112715627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_3
RBD_DEAH11
RRM_Nup35
RRM_7
RRM_RdRP1_2
RRM_MARF1
YflT
PH_35
PABC_AtC3H46
GH97_C
Motif
Other DBs
NCBI-GeneID:
112715627
NCBI-ProteinID:
XP_025623190
LinkDB
All DBs
Position
10:complement(60043020..60048312)
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AA seq
652 aa
AA seq
DB search
MAQVQVQPQNAMAGPNGGAAGGAGGNQFVTTSLYVGDLDPTVTESQLYDLFNQLGQVVSV
RVCTDLTSRRSLGYGYVNYSNPQDAARALDVLNFTPLNNKPIRIMYSHRDPSIRKSGAGN
IFIKNLDKAIDHKALHDTFSSFGNILSCKVATDSSGQSKGYGFVQFDSEEAAQKAIEKLN
GMLLNDKQVYVGPFLRKQERESATDKAKFNNVFVKNLSESTTDDDLNKVFGEFGTITSAV
VMRDGDGKSKCFGFVNFENPEDAARAVEALNAKKFDDKEWYVGKAQKKSEREHELKQKFE
QSMKEAADKYQGANLYIKNLDDTIGDDKLKELFSPFGTITSCKVMRDPNGISRGSGFVAF
STPEEASRALLEMNGKMVVSKPLYVTLAQRKEDRRARLQAQFAQMRPIAMGPTVGPRVPM
YPPSGPGIGQQIFYGQGPPAIIPSQPGFGYQQQLVPGMRPGGAPVPNFFVPMVQQGQQGQ
RPGGRRAGGVQQSQHPVPMMSPQMLPRGRMYRYPPGGRVPDVPMPGVAGGMFSVPYDVAG
MPMRDATISQQIPIGALATALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMD
QTEVLHLLESPEALKAKVAEAMDVLRNVAQQQQTGGAADQLASLSLNDNLVS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttcaagttcagcctcagaatgcgatggcgggtccaaacggaggagcagct
ggtggtgctggtggaaaccagttcgtgacgacgtcgctttacgttggggatctggacccg
accgtgactgagtcgcagttgtatgacctattcaaccaattgggtcaggttgtgtccgtt
agggtttgcaccgacctcactagccgcagatcgctcggttacggttatgtcaattacagc
aacccgcaagatgctgcaagagcactggatgttctgaacttcactcctctgaataacaag
cctatccgcattatgtattcgcatcgtgatcccagtattcgtaaaagtggtgctggaaac
atatttatcaagaatttggacaaggcaattgatcacaaggcattgcatgatacattttct
tcctttgggaatatcctttcttgcaaggttgctacagactcatctggccagtcaaaaggg
tatgggtttgtgcaattcgatagcgaagaagctgctcagaaagccatagaaaagctgaat
ggcatgttgttgaacgataagcaagtgtatgtgggacccttccttcgcaagcaagagaga
gaaagtgccactgacaaggcaaaatttaacaatgtgtttgtgaagaacctatctgagtca
accacggatgatgatttgaacaaggtttttggtgaatttgggaccattaccagtgctgtt
gtgatgagggatggtgatggaaagtccaagtgctttggatttgttaactttgagaatcct
gaagatgctgctagggctgttgaagcacttaatgccaaaaaatttgatgacaaagaatgg
tatgttggaaaagcacaaaagaaatctgaaagggagcatgagttaaaacaaaaatttgag
cagagcatgaaagaagctgctgacaaataccaaggggcaaacttgtacatcaaaaactta
gatgataccattggagatgataaacttaaggagctgttctccccatttggcactattacc
tcttgcaaggttatgagggaccctaatggaatcagtcgaggatcagggtttgttgcattc
tcaactcctgaggaggcctctagagctctcttggagatgaatggaaaaatggtggtaagc
aaacccctctatgtgactcttgcccagcggaaggaagatagaagagctagattgcaggct
cagtttgctcaaatgcggcccattgcgatgggacccactgttggtccgcgggtgccaatg
tatccccctagtggtccaggtattggtcaacaaatattttatggtcaaggccctcctgct
atcattccttcccagcctgggtttggttatcaacaacaacttgtgcctggtatgaggcct
ggcggggctcctgttccaaatttctttgtgccaatggttcagcaaggacagcaggggcag
cgtcctggtggaagacgtgcgggtggagtccagcagtcccagcatccagttccaatgatg
tcacctcagatgcttcctaggggacgtatgtatcgttatccacccggtggtagggttcct
gatgttcccatgcctggtgttgctggaggcatgttttctgttccgtatgatgtggccggg
atgcctatgcgtgatgcaacaatctcccagcaaattcctattggggctttggctactgca
ttggcaaatgcttctccagagcagcagagaacgatgctgggtgaaaatctctaccctctg
gtggaacagctggagcctgataatgctgccaaggtgactggaatgcttctggagatggac
cagactgaggttctgcacttgctcgagtcacccgaagccctgaaggcaaaggtggccgag
gcaatggacgtcttaaggaatgttgcacagcagcagcagactggcggtgctgctgaccag
cttgcttcattatcactcaatgacaaccttgtttcttga
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