Arachis hypogaea (peanut): 112716300
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Entry
112716300 CDS
T07294
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112716300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112716300
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112716300
Spliceosome [BR:
ahf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112716300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
AAA_22
DEAD
AAA_19
PWI
AAA_30
nSTAND3
T2SSE
SRP54
AAA_16
Cas3-like_C_2
Flavi_DEAD
AAA_7
ABC_tran
Motif
Other DBs
NCBI-GeneID:
112716300
NCBI-ProteinID:
XP_025623962
LinkDB
All DBs
Position
10:complement(105803134..105818327)
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AA seq
1048 aa
AA seq
DB search
MGSDDNLKAWVSDKLMSLLGYSQPTVVQYMIGLSKQAASPADLAGKLVEFGISSSDTHAF
ADEIFSRVPHKSFGLNQYQKQEREAAMLVRKQRTYDILKADDDDDYVGGEDKSSKATTST
SKKIDSRNKRFRKKTEYQDDEDDEVISRKEMERQVKRRTSPGEDTGSESEEERLKDQREK
EELEQHLKERDAAGTRKLTEQKLTRREEEEAIRRSTAQEQDDIQALRKVSRQEYLKKREE
KKLEELRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRSEEADNVNEYRMPEAYD
QEGGVNQEKRFSVAMQRYRDTNAEEKMNPFAEQEAWEEHQIGKATLKYGSKNKKQFADDY
QFVFEDQIDFIKASVMDGDNFDYEEMEDALEKSRAKSALEALQEERKKLPIYPYREELLQ
AVRDHQVLVIVGETGSGKTTQIPQYLHEAGYTKQGMIACTQPRRVAAMSVAARVSQEMGV
KLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDI
LFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADY
LDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKIAELIICPIYANL
PTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLV
TPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLANVVLTLKSLG
IHDLLHFDFMDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEFPVDPMLSKMIVAS
EKYKCSDEIISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWKE
TNYSTQWCYENYIQVRSMKRARDVRDQLAGLLERVEIELTSNSSDLDAIKKSITSGFFPH
SARLQKNGSYRTVKHPQTVNIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLV
EIAPHYYQLKDVEDAGSKKMPRGEGRAQ
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggggagtgatgacaatctgaaggcatgggtatcagataagttgatgtcactgcttgga
tattctcagcccacagttgtacagtacatgattggactatccaagcaggctgcttcacca
gcagatttggcgggtaaactagtggagtttgggatctcatcgtcagatactcatgcattt
gctgatgaaatattctctcgagttcctcataaatcttttggtttaaatcaatatcagaaa
caagagagagaagctgcaatgttggtaaggaagcagaggacttatgacattttgaaggct
gatgatgatgatgattatgttggtggtgaagataaatcttccaaagctactacatcaacg
tctaaaaagattgatagccgtaacaaacgtttcaggaagaaaactgaatatcaagatgat
gaagatgatgaggtaatttcaagaaaggaaatggagagacaagttaagagacgaacttct
cccggtgaagatactggatcagagtcagaagaagaaagattaaaagatcaaagagagaag
gaggaactagagcaacatctgaaagaaagagatgcagcagggacccggaagttgactgaa
caaaaattgacaagaagggaagaagaagaggcaattcgaagatctactgcacaagagcag
gatgatattcaagctttgagaaaggtttcaaggcaagaatacttgaagaaaagggaggag
aagaagttagaagaactgagagatgatatagaagatgaacaatatttgtttgagggcgtg
aagcttactgaagcagaatatcgtgagcttagatacaagaaagaaatatatgaacttgta
aagaagcggtcagaggaggctgacaatgtcaatgagtataggatgccagaagcttatgat
caggaaggtggtgttaatcaggagaagagattttctgtggctatgcaacgttacagggat
acaaatgctgaggagaaaatgaacccatttgctgaacaagaggcatgggaggaacaccaa
atcggaaaggcaacgctaaagtatggttcaaaaaataaaaaacaattcgccgatgactat
cagtttgttttcgaggaccagattgattttatcaaggcatcagtgatggatggagataat
tttgattatgaagaaatggaagatgcacttgaaaagtccagagcaaagtcagctttagag
gcacttcaggaggagaggaaaaagttgcccatttatccttatcgggaggaattgctccaa
gccgtgcgtgatcatcaggtgcttgtaattgttggagaaactggttctggaaagaccaca
cagattccccaatatcttcatgaggctggctacacaaagcaaggaatgattgcatgtacc
cagccacggcgtgttgcagctatgagtgttgctgctcgtgtttctcaagaaatgggtgtt
aagctaggacatgaggttggttactctatccggttcgaggactgtacatcggagaagact
attctgaaatatatgactgatggaatgttgttgagggaattccttggtgaacctgatctg
gcaagttacagtgttgtcatggtggatgaggctcatgaaaggacactctcaactgatatt
ttatttggattagtaaaggatatttctcgtttccggcctgatcttaagttgctgatatct
agtgctacactagatgcagagaagttcagtgactactttgattctgctccaatatttaaa
attccagggagacggtatcctgttgaaataaactttacaaaagcaccagaagctgactac
ttagatgcagctattgtcacatcacttcaaatccatgtcactcaacctcctggtgatatc
ttggtgttccttactggtcaagaagaaatcgaaactgctgaagaaatcttaaagcatcga
actagaggcttgggcacaaaaattgccgagttaataatatgccctatatatgccaaccta
ccaactgagctacaggctaaaatatttgaacccacacctgaaggggcaagaaaggttgtc
cttgcaactaatattgctgaaacatcgttgacaattgatgggatcaagtatgtcattgat
ccaggattctgtaagatgaaaagttataatccaagaacaggaatggagtccttattggta
acacccatctcaaaagcttcagcaatgcaaagagctgggcgttctggaagaacaggacct
gggaagtgcttccgattgtatactgcatataactttcacaatgatctagatgataacact
gttccagaaatacaacggactaacctggcaaatgtagtgttgactttgaaaagtcttggt
attcatgacttacttcactttgactttatggatcctccacctgcagaggcattattgaaa
gccctagagcttctgtttgcattaagtgcactaaataaactgggtgagttaacgaaggta
ggaagacggatggcagagttcccagttgatcctatgttgtcaaaaatgattgtagcttca
gaaaagtacaagtgttcagatgagatcatttctattgctgctatgctttctgttgggaac
tcgattttttatcgtccaaaggataaacaagtccatgcagacaatgcaaggatgaacttt
cacactggaaatgttggagaccatattgcattgctaaaggtctacaactcatggaaggag
accaactattcaacacaatggtgctatgaaaattatatacaggtaaggagtatgaaacgg
gctagggatgtccgtgatcaactcgcaggtcttctagagcgggttgagattgaactaacg
tcaaattctagcgatttggacgccatcaagaaatccataacatctggatttttcccccat
tctgcacgactgcaaaagaatggatcatatcgaactgttaaacatccacagactgttaac
atacatcctagttcggggctggcacaggttcttccaagatgggttgtataccatgaacta
gtgcttacaaccaaggaatatatgagacaggtcactgaattaaagccagagtggttggtg
gagatagctcctcactattaccagctcaaggatgttgaagacgccggttccaagaaaatg
ccccgtggagaaggacgtgcacaatag
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