KEGG   Arachis hypogaea (peanut): 112716432
Entry
112716432         CDS       T07294                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
ahf  Arachis hypogaea (peanut)
Pathway
ahf03018  RNA degradation
ahf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ahf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112716432
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112716432
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ahf03019]
    112716432
   03041 Spliceosome [BR:ahf03041]
    112716432
Messenger RNA biogenesis [BR:ahf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112716432
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     112716432
Spliceosome [BR:ahf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    112716432
SSDB
Motif
Pfam: LSM RimP_C
Other DBs
NCBI-GeneID: 112716432
NCBI-ProteinID: XP_025624124
LinkDB
Position
10
AA seq 98 aa
MSDGPGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDSNLDLKNLRAHPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcagatgggcctggacttgagtctcttgttgatcaaacaatttcagtcatcacaaat
gacgggcggaatatagtgggaatcctgaagggttttgaccaggctacaaacattattctg
gatgagtctcacgaacgagtttattctaccaaggaaggtgtccagcaacttgttctaggc
ttgtacattattaggggtgacaacataagcgttgttggtgaactagatgaagatttggat
tcaaacctggacttgaaaaaccttagagcacatcccttaaagcctgttattcactga

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