Arachis hypogaea (peanut): 112716479
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Entry
112716479 CDS
T07294
Name
(RefSeq) sister chromatid cohesion protein SCC2
KO
K06672
cohesin loading factor subunit SCC2
Organism
ahf
Arachis hypogaea (peanut)
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ahf03036
]
112716479
Chromosome and associated proteins [BR:
ahf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
112716479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
112716479
NCBI-ProteinID:
XP_025624185
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All DBs
Position
10:complement(109752212..109767408)
Genome browser
AA seq
1804 aa
AA seq
DB search
MSFPDTSGAATAVVAVASSGRRGIGLSNTIHSEVAPCLPLPSLPVFCGSSDRDLRLVDSP
AMLNRVDVLAQAGKIAELLQHTDVSYLNLRDDNGSGSYMYIEPLELHDEVLRCNPEAFEY
STTGPVKEQISGRAVGEKKLRESSLPGINQTKEDYNATPNRQHDHFSSNDISTLSSKKSK
VRKKGGDGISVGPSSAELQDATIGRFCEFLEDLCSKAEVQTDDRDEAEWLPLSLSDLRLL
VNEIMSIHEKKLMHIVPVEVLVRILNVLDHQIHRAEGLSIEDCDNSDSELISSILIALES
IHAALAVMAHTEMPKQIYKEEIIERILEFSRRQIMDVMCASDPSYRALHRPSENTACEVD
DYYEENDAEFGSASKKRRTSKSTKMRKSTSNRVSSAVNTILQKLCTVLGLLKDLLLIERL
SDSCILQLVKTSITTFMVENIQLLQLKAIGLLSAIFYLYTQHRTYVIDEVLQLLWKLPYS
KRAIRAYHIREEEQRQIQMVTALLIQLIHCSANLPDALRQASSGNAVLEVSVDPNDPTKG
HEATTEACCLFWSRVLQRFASVKTQDASELKSIMENLVTDLLTTLNLPEYPASAPILEVL
CVLLLQNAGPKSKDVSARSMAIDILGTIAARLKRDALVCSQEKFWILQDLHGQDSANQQY
PKDSCCVCMDGSTDNLLICHGCQRPFHTDCLGIKEHEVSNWNWYCQTCICHKQLLVLQSY
CNSRCKDDVTKKRNASKDSEISKHEIVQQLLLNYLQDVTSADDIHLFVCWFYLCLWYKDD
PNCQRKPIYHLARMKSRIIVRDSSTISSTLTRDSIKKITLILGQNSSFCRGFDKILHVLL
ASLRENSPVIRAKALRAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRH
IASHPDVGFKYFEKIAERIKDTGVSVRKRAIKLIRDMCSSNVNFSGYTRACTEIISRISD
DESSIQDLVCKTFHEFWFEEPYGSQTQVFGDGSTVPLEVAKKTEQIVEMLRRMPNNQLLV
TVIKRNLSLDFLPQAAKAVGVNPVSLATVRKRCELMCKCLLEKILQVEEINSNEVEVHAL
PYVLALHAFCLVDPTLCAPASNPSQFVVTLQPYLKTQVDNRMVAQLVESIIFVIDAVLPL
LRKLPPNIVEELEQDLKHMIVRHSFLTVVHACIKCLCSVSNIGSKGAAVVEHLIQVFYKC
LDNKQQVGRSLFCLGSLIRYGNSLLVSSSNKVIDVRRSLTLCIKFLSEEDFVVKARSLQA
LGFILIARPEYMLEKDIGKILEGTLSSNADIRLKIQALQNMLEYLLDAESKMGTDKPDDN
VTGYTVGAVQSVPVAAGAGDTNICGGIIQLYWDNILGRCLDSNEQVRQSALKIVEVVLRQ
GLVHPITCVPYLIALETDPLESNAKLAHHLLMNMNEKYPAFFESRLGDGLQMSFIFMQSI
STASENGNQKIPSKIPVSGKGKPETVSLAQARLGVSRIYKLIRGNRNSRNKFMSSIVRKF
DNPKWSHSVIAFLSYCTEVLGLLPFISPDEPLYLIYAINRIVQIRAGPLEANFKAWSSRL
SRNENQSTPNGNGMYQQETDKSTIITQGTSMDLNGTFQQNLDARPDLNDMRSVDLNGTFY
QQPDDTLSNNGSSEPKPHAVGSDYFAFSKDDLERVQADCLSAIALQFLLKLKRHLKIMYS
LNDARCQAYSPTEQPKPGEVISRQNIPFNISETQFSVPSNPQELIQRYQEFKYALREDTV
DYSLYTANIKRKRPTPRKVRRSAPMASGDLEDDDDDDDDWGGGMRKITSSGGRRANLRSS
SRQY
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgagttttccagacacttccggcgccgccaccgccgtggtggcggtcgcatcgtccggc
cgccgcggcatcggactttcgaacactatccactccgaggtcgctccctgcctgccgctg
ccttctcttccggtgttctgcggctcctccgatcgggacctccgcctagttgactcgcca
gcgatgctgaaccgtgtcgacgtgctcgcacaggctggaaagatcgctgagctgctccag
cacaccgatgtgtcgtacttaaacttaagagatgataacggcagtggttcatatatgtac
attgagccattggaactccatgatgaggttctcaggtgcaatcctgaagcatttgaatac
agtaccacaggtcctgtcaaggagcagatctctggtcgtgcggtgggtgagaagaagctc
cgtgagtcgagtcttcctggcataaatcaaactaaagaagactacaatgcaacccctaat
cgtcaacatgaccatttttcttcaaatgacatttcaacgttatcttccaaaaaatcaaaa
gtaaggaagaaaggaggcgatggaatttctgtagggcccagttctgccgagcttcaagat
gcaaccattggaaggttttgtgagtttttggaagacttatgcagcaaagctgaagttcag
actgatgatcgagatgaagcagaatggctgccattgtcactttcagatcttagattgctt
gttaatgaaataatgtctatacatgagaagaaactaatgcatattgttcctgttgaagtc
cttgtgaggatactgaatgttctagatcatcaaatacatagggcagaaggcctgtcaatt
gaggattgtgataattcagactcggaactaatttcatctattttgatcgcattggagtcc
attcatgctgcactagctgtgatggctcacactgagatgccgaagcaaatttataaagaa
gagatcattgagagaattttggagttttccaggcgtcaaataatggatgttatgtgtgca
agtgatccatcgtatcgtgcgttacacagacctagtgaaaacactgcatgtgaagttgat
gattattatgaagaaaatgatgcagaatttggttcggcaagcaagaaacgtcgtaccagc
aagagtacaaagatgaggaaatcaacatcaaacagggtttcttctgctgtgaatactatc
cttcagaaattatgcactgttcttggattgctgaaggatttgttgttaattgagaggtta
tcagatagttgcattcttcaacttgtaaaaacaagcattacaacattcatggttgagaat
atccagcttttgcagctgaaggcaattggtttacttagcgcgatattctatttatacaca
caacatcgcacatatgtgatagatgaagtgcttcagcttctttggaaattaccatattca
aaacgagctataagagcctaccacatacgcgaggaagagcaaagacagatccagatggtt
accgctttgctgattcagttaattcactgtagtgctaaccttccagatgctttaagacaa
gcatcaagtggtaatgctgtgttggaagtctcggttgaccctaatgatccaactaaaggc
catgaagccacaacagaagcttgctgtctattctggagccgtgtacttcagcggtttgca
agtgtgaagacccaggatgcttcagagctgaaatccataatggagaatcttgttactgat
ttactcacaactttaaatttgcccgagtatcctgcttcagctcccattttggaggttctc
tgtgtcctactacttcagaatgctgggccgaaatctaaggatgtctctgcacgttccatg
gctattgatattcttggtacaattgctgcaaggttgaagcgtgatgctttggtttgtagc
caggagaagttctggatacttcaggatttacatggtcaggatagtgctaatcagcaatat
ccaaaagattcttgttgtgtctgtatggatggcagtaccgacaatttattgatatgccat
ggctgccagagacccttccacactgactgcctgggtattaaagaacatgaagtttccaac
tggaactggtactgtcagacatgcatctgtcataagcaactgcttgtattacagtcatat
tgcaattcccggtgtaaggatgacgtgacaaagaaacgtaatgcgtcaaaagattctgaa
atttcaaagcatgaaattgttcaacagttgctcttgaattaccttcaagatgtcacttct
gctgatgatatccatctgttcgtttgctggttttatctctgcctgtggtacaaagatgat
cctaattgtcagcgaaagcctatataccaccttgctagaatgaaatcaagaatcattgta
cgggactctagtaccatctcatccacgttgacgagggattcaattaagaagattacttta
attttgggtcaaaacagttcattttgtcgagggtttgataagattcttcacgtgcttctg
gcaagcctaagggagaactctccagttatcagggctaaggctttacgagctgttagtatc
attgtagaggctgatccagaggtattgggtgataaacgagtacagtcagctgttgaagga
aggttttgtgactctgcaatttctgttagagaagcagcattggaacttgtcggcaggcac
attgcttcacatccagatgtgggttttaagtattttgaaaagatcgctgagagaatcaag
gatactggagttagtgttcgaaaacgagcaataaaacttattcgagacatgtgcagttca
aatgtcaacttctctggctatactagggcttgcacagaaataatttcacgcattagtgat
gatgagtcaagtatccaggaccttgtttgcaaaacgtttcatgagttctggtttgaggag
ccttatggttcacaaactcaggtctttggagatggtagtactgttccactcgaggtggct
aagaaaacagagcaaattgttgaaatgctcaggagaatgcccaacaatcaacttcttgta
actgtaataaagcgcaacttatcacttgattttttgccccaagctgcaaaagctgttggt
gtcaaccctgtgtcccttgctacagtgcgtaagcgctgtgagttaatgtgcaaatgcttg
ctggagaagatattgcaggttgaggaaattaatagcaatgaagtggaggtgcatgctcta
ccatatgtgctggccttgcatgcattttgtcttgtggacccaactctctgtgcacctgct
tcaaacccatcccagtttgttgttactttgcagccatatcttaaaacgcaggttgacaat
cgcatggttgcacagctagttgagagtataatctttgtaattgatgctgtgttgccctta
cttcggaagttacctccaaatattgttgaggagctagagcaagatttgaaacatatgatt
gtccggcattctttcttgacagtagtccatgcttgtatcaagtgcctctgctctgtaagc
aacataggcagtaaaggggctgctgtggtggagcatcttattcaggtcttctacaaatgt
ttggacaataagcagcaagttgggcgatcactcttttgtcttggatcactcattcgatat
ggcaattctttgttggtaagctcaagcaataaagttattgatgtcagaaggagtcttacc
ttgtgtataaagtttctctctgaggaggattttgttgttaaggctagatcattgcaggca
ctagggtttattttaattgccaggcctgaatacatgttggaaaaggatattggaaagata
ctggagggaacattatcttcaaatgctgacattcgtcttaagattcaagcattgcaaaac
atgttggagtatctccttgatgctgaaagcaaaatgggaacagataaacctgatgataac
gtaactggttacacagttggagctgtgcagagtgtacccgttgctgctggagctggggac
acaaacatatgcgggggtataattcagttatattgggataatattttaggcagatgtttg
gattccaatgaacaagtccgccaatcagctctgaagatagttgaagttgtgttgcgccaa
ggtcttgttcacccaatcacttgtgttccatatctaatagcacttgaaactgatcctctg
gagtcaaatgcaaagctggctcatcatctcctaatgaatatgaatgagaagtaccctgca
ttttttgaaagtcgtttgggtgatggacttcaaatgtcatttattttcatgcaatcaatt
agcactgcttctgaaaatggcaatcagaaaatcccatctaaaatccctgtatctggaaaa
gggaaacccgaaactgtctcactagctcaagcaagacttggtgtttctagaatatacaag
ctcatccgggggaacaggaattcaaggaataaatttatgtcatcaattgtgcgaaaattt
gacaatccaaagtggagccattcagtaatagctttcttatcatactgcacagaggtcctt
ggattgctgcctttcatttcccctgatgagcccctttatctaatatatgccatcaatcga
atagttcaaattagggctgggccactagaagcgaattttaaagcctggagttcaaggtta
tcaagaaatgagaatcaaagtacaccgaatgggaatggaatgtatcaacaggagacagac
aagtccactattataacccaaggaacatcaatggatttgaatggaacatttcagcaaaat
ctagatgctcgtccagatttgaatgacatgagatcagtggatttaaatggaacattctac
caacagccagatgatactttatcgaataatggcagctccgaaccaaagccgcatgctgtg
ggttctgattattttgccttctcaaaagatgatctggagagagttcaggcagactgctta
tcagcaattgcactgcaatttctcctaaaattgaagagacatctgaaaatcatgtatagt
ctcaatgatgctagatgtcaggcatattcaccaactgaacagccaaaacctggagaagtt
atctccagacagaatatcccattcaatattagtgaaactcagttcagcgtgccttcaaat
ccacaagaattaatacagagataccaggaatttaagtatgcattgagggaagatacggtg
gattattcactgtacactgcaaatataaaacggaagcgacctacacccagaaaagttcgg
agatctgcacccatggctagtggggacttagaggatgatgatgatgatgatgatgattgg
ggtggtggaatgcgcaagataacaagtagtggtggccgtagagctaaccttagaagcagc
agtaggcaatattga
DBGET
integrated database retrieval system
