KEGG   Arachis hypogaea (peanut): 112720076
Entry
112720076         CDS       T07294                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
ahf  Arachis hypogaea (peanut)
Pathway
ahf03013  Nucleocytoplasmic transport
ahf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ahf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112720076
  09122 Translation
   03013 Nucleocytoplasmic transport
    112720076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ahf03019]
    112720076
   03041 Spliceosome [BR:ahf03041]
    112720076
Messenger RNA biogenesis [BR:ahf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     112720076
Spliceosome [BR:ahf03041]
 Complex C
  Other components
   EJC/TREX
    112720076
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112720076
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_C DSE1_N Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 WD40_RFWD3 eIF2A Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Tricorn_2nd Beta-prop_DCAF12 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th TRM82_WD PAC11 Beta-prop_IFT80_2nd Beta-prop_WDR41 Beta-prop_ACSF4 Beta-prop_Nup120_160 TP_0598_N DUF7099 WD_LRWD1 Beta-prop_WDR11_1st CNH
Other DBs
NCBI-GeneID: 112720076
NCBI-ProteinID: XP_025626664
LinkDB
Position
11:6683902..6687997
AA seq 313 aa
MDEKIPFKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIE
LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT
HVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLSYPSL
RPLDTLMAHTAGCYCIAIDPVGRYFAVGSADSLVSLWDISEMMCVHTFTKLEWPVRTISF
NYTGDLIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQA
DEGVFRIFGFESA
NT seq 942 nt   +upstreamnt  +downstreamnt
atggacgaaaaaatccccttcaagaatctgcatagcagagagtactctggtcacaagaag
aaggtgcactctgtggcatggaactgcattggaacaaaactcgcttctggctctgttgat
caaactgctcgaatctggcatattgagccacatggccatggtaaggtcaaagatatcgaa
ttgaagggtcacactgatagtgtagatcagctatgttgggaccccaaacatgctgatctg
attgcaactgcatcgggtgacaagaccgttcgtttgtgggatgctcgtagtggaaaatgc
tcacaacaggcagaacttagtggggagaatatcaatattacctacaaacctgatgggact
catgtagctgtaggcaatagggatgatgagttaacaatattggatgtccggaagttcaaa
ccaattcataggcggaagttcaattacgaggtaaatgagattgcttggaacatgacagga
gagatgttctttctaacaacaggaaatgggactgtggaagtactgtcttatccatctctt
cgacctcttgataccctcatggctcatacagctggttgttattgcatcgcaatcgaccca
gtaggaagatattttgctgttggaagtgctgattcccttgttagcttgtgggatatctca
gagatgatgtgtgttcatacattcacaaagctcgaatggcctgttcggacaatcagtttc
aattatactggggatttgattgcttctgcgagtgaagacttatttatcgatatttcgaat
gtccaaactggacgaactgtgcatcagattccttgtagagctgccatgaacagtgttgag
tggaaccctaaatataatttactggcttatgctggtgatgacaaaaacaagtatcaggct
gatgaaggtgttttccgaatttttggctttgaaagtgcataa

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