Arachis hypogaea (peanut): 112720089
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Entry
112720089 CDS
T07294
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112720089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112720089
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112720089
mRNA degradation factors
5'-3' decay
Decapping complex
112720089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_HPS5
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
112720089
NCBI-ProteinID:
XP_025626690
LinkDB
All DBs
Position
11:complement(6977295..6987549)
Genome browser
AA seq
1216 aa
AA seq
DB search
MGMLSAANAVAAALNRVASSKVPRGRRLAGDHVVYDVDVRLPGEVQPQLEVAPITKYGSD
PNLVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLKGHNQRVTDLAFFAEDVHLLAS
VGTDGRVFVWKISEGPDDEDKPQITANIVIAIQMVGEEKVENPRICWHCHNQEILIIGMG
RHVLRIDTTKVGNGEAFVTEDTLRCPLDKLMDGVQLVGTHDGEVTDLSMCQWMRNRLVSA
SHDGTIKIWEDRKTQPLAVMRPHDGHPVFSATFFTAPHRPDHIVLITGGPQNREVKLWVS
ASEEGWLLPSDAESWKCTQTLELRSSAQPSVKDSFFNQVAALSHAGLLLLANAQRNAIYA
VHLEYGSNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDL
AQCLPSPFENVGLEKPDSSVSRDADGFSTVDSSGVRASEMSSASSAPKTMSQAGGTESAL
AGRYPLSSGYIGGPTSAPSSSDADIVCVPSPPLPLSPRLSRKLSDFRSSQSNLGDHVGDQ
SINDYSVDRQMPTIHRNLSDAPLMNNDLKNDEKVKQDDISSVLNPSVMFKQPTHLVTPSE
IIKAGSPPETNIIDRNSEGDTKIPDVVDLGNAEVEVKVVGEAPPDQSDEYNHQGSQQNLV
SDAKEKYFCSQASDLGIEMTRECCAISGGTYITGEPGQVDLSLGESLSQTSNAGEDGLQD
STKDVHEKISDSSASMTVPPSPAPNTKGKRQKGKNSQASGPSSPSPSACNSVDLSNELGG
SSNLPSAENAFHQILAMQESINQLLTMQKEMQKQMTMMVTVPVTKEGRRLEAALGRTVEN
AVKANTDALWARIQMENVKNEKLLRDRIQHVTGLISNFMNKDLPAILEKILKKEIASVGP
AAVRAMTPTIEKIISSAIVESFQRGVGDKAVNQLDKSVNAKLEATVARQIQAQFQTTGKQ
VLQDALKSSFEISVVPAFEKSCKAMFDQVDSTFQKGMVEHSTAVQQRLESGHTSLAMTLR
ESINSASSVTQTLSREVLEGQRKLMAYATAGANSGTLNPLPIQLNNGPLLREKVEVPLDP
KQELARLIAERKFEEAFTGALQRSDVSIVSWLCSQVDLHGLLSMVPLPLTQGVVLSLLQQ
LACDINNDTSRKIAWMMDVAAAINPSDPMIAMHVRPIFEVYQILNHQRSLPTMTGPDLSS
ILLLLHVINSMLMTCK
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggggatgttatctgccgcgaacgctgtggcagctgcgctgaatcgcgtggcgagcagt
aaggtgccgagagggaggcgcctggcgggggaccatgtggtgtatgacgtggatgtgagg
cttcccggggaggtgcagccgcagcttgaggtggcgccaataacgaaatatggttcggat
cctaacttggttcttggaaggcaaatagctgttaacaagtcttacatttgctatgggttg
aagcaagggaacattagagtgcttaatattcacacagctgttaggtcccttctcaaaggc
cacaatcagagggtcacagacttggctttctttgctgaagatgttcatctcctggctagt
gttggaacagatggccgtgtctttgtatggaagatctctgaaggtcctgatgatgaagat
aagcctcaaattactgccaatattgttatcgctatccaaatggtgggagaggagaaagtt
gaaaatcctcgaatctgctggcactgccacaaccaagaaattttgataattggtatggga
agacatgttctaagaattgacaccacaaaagttggaaatggtgaggcctttgtgacagag
gacactctgaggtgtcctcttgacaagctcatggatggtgttcagctggtggggactcat
gatggagaggtgactgatttgtcaatgtgccaatggatgagaaatcgtttggtatctgca
tcacatgatggcacgataaagatctgggaagatcgcaagacacagccacttgcggtgatg
agaccacatgatgggcatcctgttttttctgctacatttttcactgctccccaccgacct
gatcatattgttcttataactggtggacctcaaaatcgggaagttaagctttgggtctca
gcaagtgaagaaggttggctacttccaagtgatgctgaatcatggaaatgcacgcagaca
ttggagttgaggagttcagctcaaccatctgttaaggactcattctttaaccaggttgca
gcattgtctcatgcaggtctgcttttacttgcaaatgctcagaggaatgctatatatgct
gtacacttagaatatggttctaatcctgaatcaacacgcatggattatatagctgagttt
actgtgaccatgcccattctgagttttactgggacaagtgatatattacctcatggtgaa
catattgttcaggtttattgtgttcaaacacaggccattcagcagtatgctttggattta
gcccaatgcctgccatcaccatttgaaaatgtgggactagagaagccagattcctctgtt
tcccgtgatgctgatggattcagtactgtggactcatctggtgttagagcatctgaaatg
tcgtcagccagttctgctcccaaaacaatgtcacaagctggtggcactgagagtgcactt
gctggaagataccctttaagctctggctatattgggggacctacttcggctccatccagt
agtgatgctgatattgtttgtgttccatctccgcctcttcctttgagcccaaggttgtct
aggaaactgtctgatttcaggagttcacaatctaatttgggtgaccatgttggggaccaa
tccattaatgattattcagttgacagacaaatgcctactattcataggaacttgtctgat
gcaccacttatgaataatgatttgaagaatgatgagaaagtcaaacaggatgatatttcg
agcgtacttaatccctctgttatgtttaagcaaccaactcacctggttactccttctgaa
atcattaaggccggttctccccctgagacaaatataattgatagaaatagtgaaggagat
acaaagatcccagatgtggttgatttgggtaatgctgaagtagaagtgaaagtggtcggt
gaggctccacctgatcaaagcgatgagtataatcatcagggatcacaacaaaacctagtt
tctgatgctaaagaaaaatacttttgctctcaggcttcagatctcggtattgagatgacg
cgagaatgctgtgcaatatcagggggaacttatattacaggggaaccagggcaagttgat
cttagtttaggggaatcactttcccaaacttctaatgctggtgaggatggactgcaagac
tcaacaaaagatgtgcacgaaaagatttctgactcatctgcatccatgacagtaccacct
tcacctgcacctaacacaaaagggaagagacagaagggaaaaaattctcaagcatctggt
ccatcttccccatctccaagtgcatgcaattcagttgatttgtcaaatgaactaggtgga
agttcaaacctcccatctgctgaaaatgcatttcatcaaattctagcaatgcaagaatca
attaatcagttattgactatgcaaaaagagatgcagaagcaaatgacaatgatggttaca
gttccagttacaaaagaaggtagaaggcttgaggcagccctggggagaactgtagaaaat
gctgtcaaggccaatacggatgctttgtgggctcgaattcaaatggagaatgtaaaaaat
gaaaagttgctacgagatcgtattcagcatgttacaggtttgattagtaacttcatgaat
aaggatctaccagcaatattggagaaaatactaaagaaggaaatagcttcagtgggtcca
gctgcagtccgtgcaatgacccccactattgagaaaataatatcttcagccattgtagag
tctttccagagaggagtaggtgataaggcagtaaatcaacttgataaatcagtcaatgca
aaacttgaagccactgttgccaggcaaattcaagcacagtttcagacgactggaaaacaa
gtgcttcaggatgcactcaaatccagttttgaaatatcagtggttcccgcatttgagaaa
tcatgcaaagcaatgtttgaccaagttgattctacatttcaaaagggcatggttgaacat
tcaactgcagtgcaacaacgccttgaatctgggcatacttcactggcaatgactctaagg
gaatccattaattcagcttcatcagttactcaaactttgagtagagaagtgctagaggga
cagagaaagctaatggcatatgcaactgcaggagctaactctggcacactaaatcctttg
cccattcagctgaacaatggacctctgcttcgtgaaaaggttgaagtgcctctcgatccc
aaacaagagctagcaaggttgatagctgaacggaagtttgaggaagctttcaccggggct
ctacaaagaagtgatgtgtcgattgtatcttggttatgttctcaggttgatttacatgga
cttttgtcaatggttcctcttcctttgacccaaggagtagtgctttcacttctgcagcaa
ctggcatgtgatattaacaatgatacctcacgaaagattgcatggatgatggatgtggct
gccgccattaatccctcagaccccatgattgcgatgcatgtgcgacccatatttgaagtt
tatcagatactgaatcatcaacgtagcttgcctacaatgactggacctgatctttcaagc
atccttcttttattgcatgtcatcaactctatgctcatgacatgtaaatga
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