Arachis hypogaea (peanut): 112720125
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Entry
112720125 CDS
T07294
Name
(RefSeq) poly(A)-specific ribonuclease PARN
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112720125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112720125
Enzymes [BR:
ahf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
112720125
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112720125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
112720125
NCBI-ProteinID:
XP_025626737
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All DBs
Position
11:8081404..8087327
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AA seq
720 aa
AA seq
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MNPTPRKLALSLSRALSRALTTATAAASQSGSAFPLKTVTTKNFEASLSELRDHVRTSDF
VAIDLEMTGVTSAPWRESFEFDRSDVRYLKVRDSAHKFAVVQFGVCPFRWDSSNHYFVAY
PYNFYVFPRQELEDLAPCYEFLCQTTSMDFLAKYQFDFNACIREGISYLSRAQESEAVRR
LNSRYESEHSNICKLKDVKDIQLISMADILFSERMKNKFSKWRDGLLQEQSREEQIIGTS
KDSKQLFEVIFFKMHPAIRLSGFTSRQLKLIQLVIRKHFQDLSYVCVNSEDSGSQHMVVY
TDSKDELNLLLKEVKDGNRKAEEKKIQNAVGFRHVIDLLSAEKKLIVGHNCFLDIAHVYN
KFIGPLPGTPEEFVTSINKYFPHIVDTKILFNNNHVLQEKMKRSRKSLASAFSLFCPQIA
VGSNSSDLDSPLHVKVNVEVNDLRSSSWNPGAKHEAGYDAFMTGCIFAQICSDLGVDYKH
HESSPQQLALNEKLQKYVNHLYLSWIHGDIIDLNTGDKVAESTPSNNLKRQYPKILFENI
VIIWGFPSQLKANDLRVCISKVFGPASVVSVYHLDATAVFVQFSKTELVYDFLLLKDTLE
RSDGAILVLHPLAKILEGGNTCAADYDTYKEICGSPISEALFAVQAKAVGIKWKTKLVES
HVTVQTEDHESPGAEGSVNSVMKFVKSKPNIIEQLRNAPSHRKVSSFETEDSCCAVEMNA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaacaccaaggaaactcgcactctcactctcacgtgcgctctcacgtgcccta
actactgccaccgccgcagcctcgcaatctggatcggctttcccactcaagacggttacc
accaaaaacttcgaagcgtctctttcggagctccgggaccatgtccgaacctccgatttt
gttgccatcgaccttgagatgaccggcgtaaccagtgcaccctggcgggagtccttcgag
ttcgaccgctccgacgtccggtacctgaaggtcagggactccgcccacaagttcgccgtc
gttcagttcggcgtctgccccttccgttgggactcttccaaccactacttcgtcgcttat
ccgtacaatttctatgtttttccacgtcaggagcttgaggatctggctccatgttatgaa
tttctctgccagactacttcaatggatttcttggctaaataccagtttgatttcaatgca
tgcatacgtgaaggaatatcttatttatctagagcgcaagaaagcgaagcagtaaggaga
ttgaattctagatacgaaagtgagcattcaaacatttgtaaattaaaagacgttaaagac
atacaattgatcagcatggcagacatattgttctctgaacgaatgaaaaacaaattcagt
aaatggcgtgatgggttattacaggagcaaagtcgagaagaacaaattataggaacttca
aaagactcaaaacagctatttgaagtgattttctttaagatgcatcctgctattagactt
agtggatttacatctcggcagctaaaattgattcagttggtcatcagaaaacactttcaa
gatttgtcatatgtatgtgtgaatagcgaagattctggttcacaacatatggttgtatat
acagactcaaaggatgaactaaacttacttctgaaggaggtaaaagatggaaatcgcaag
gcagaagagaagaagattcaaaatgctgtgggatttcgccatgttattgatctcctttct
gcagaaaagaagttgattgttggtcataattgttttctggatattgctcatgtctacaac
aaatttataggtccccttccagggactcctgaagagtttgtcacctctattaacaagtat
tttccgcacattgttgacactaaaatactcttcaacaataatcatgtgctccaagaaaag
atgaaaaggtcaagaaaatcactggcctctgcattttccttgttttgtccacaaattgca
gtaggttccaacagcagtgatcttgattcacccttacatgtgaaagtgaatgttgaagtt
aatgatttgagatcatcgagctggaaccctggagccaagcatgaggccggatatgatgct
tttatgactggttgcatctttgctcaaatatgcagtgatttaggagttgattataaacac
catgaatcttctccacaacaactagccctcaatgagaaactacaaaagtatgttaaccat
ctatatcttagttggatacatggggacattattgatctgaataccggtgataaggttgca
gaatctacaccaagcaataacctcaagaggcaatatccaaagattttgtttgaaaatatt
gttattatttggggttttccttctcagctgaaggcaaatgatctaagagtgtgcatatct
aaagtttttggtccagcttctgtggtttctgtctaccacttggatgcgactgcagtattt
gtgcagtttagtaagacagaactagtttacgacttccttttgttgaaggacaccttagaa
agaagtgatggcgcaatcttggttttgcaccctcttgcaaagattttggaagggggcaat
acatgtgccgctgattatgatacttacaaagaaatctgtggttcacccatttccgaagct
ttgtttgccgtgcaggcaaaggcggttggcataaagtggaagaccaaattggtagaaagc
catgtcacagtgcaaactgaagaccacgaaagtccaggcgcagaaggttctgtaaattcg
gttatgaaatttgtaaagtccaaaccaaacataattgagcagttaagaaatgctccatct
cataggaaagtctcatcttttgagaccgaagattcttgctgtgcagtagaaatgaatgct
tga
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