Arachis hypogaea (peanut): 112720587
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Entry
112720587 CDS
T07294
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf04120
Ubiquitin mediated proteolysis
ahf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112720587
04120 Ubiquitin mediated proteolysis
112720587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ahf04121
]
112720587
Enzymes [BR:
ahf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112720587
Ubiquitin system [BR:
ahf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112720587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
112720587
NCBI-ProteinID:
XP_025627357
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All DBs
Position
11:complement(28054728..28059708)
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AA seq
552 aa
AA seq
DB search
MMRLKTYAGLSLIATLAITYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCILWQL
TKKVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPTVPMLSHVRIVSFMGFLLLLDSLFLYSNLKHLLQTWQPSVSIFFSFEYM
ILATTTVSIFVKYLFYVSDMLMEGQWERKPVFTFYLELIRDLLHLSMYLCFFLVIFVNYG
VPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGATATVGQQGAQPDGHRQGTGT
STGSTAQNEVGSGGAIDNLSQHQARLQAAAAAAASIYEKSYVYPSPTSLVCSPGYTLQPP
VQMSMGKSVNTALNGEQASGEQAQQQFVLPGGPMISFPQMGPFHFLPSQTRGAPANYGVE
FGVDPNMPSSHLEAHRKLLQYQIEILQNQLKLLQRTKVETGVDEGTSSSSTSTADSRGKQ
IASSHEIHREKE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgaagacatatgccggtctcagtttgattgcaaccctggctatcacatat
catgcatttaacagtagaggccagttttatccggcaatggtgtatctttcaacttccaag
atcagcttagtgcttcttctcaacatgggtttggttattatgtgtattctatggcagttg
actaaaaaggtattcctgggttctcttagagaagctgaggtagaaaggcttaacgagcaa
tcgtggagggaggttatggaaatcctctttgccattactatttttaggcaggatttctca
gttacgtttcttgcgatggtcacagcgctattgttgattaaagctttgcattggttggct
caaaagagggttgagtacattgagacaactcctacggtgcccatgttgtcccatgttcgg
attgtatcttttatgggtttcctccttctcctcgatagcctattcttatacagtaatctg
aagcatctgctacaaacatggcaaccgtcagtttcgatattcttctcttttgagtacatg
atactggcaacgacaacagtgtcgatttttgtaaaatatcttttctatgttagtgacatg
ctcatggaaggacaatgggaaaggaaaccagtcttcacattctacttggaacttatcagg
gacttgcttcacttgtctatgtatctgtgcttcttcctcgtaatttttgtaaactatggt
gttcctttgcacttaatacgggagctctatgagacatttaggaacttcaaagtccgtgtt
gcagattacatacgatatcgtaagatcacttcaaatatgaacgaccgttttccagatgca
acgcctgaagagcttaatgcaagtgatgcaacttgcattatctgtcgtgaagagatgact
actgccaagaaacttatatgtggacatttgtttcatgttcattgcctccgatcatggttg
gagcggcaacatacttgccctacctgcagagccctggttgttcccccagaaaatggggca
acagcaactgtaggccagcaaggagcacaaccagatggtcatcgacagggaacagggact
agcactggaagcacagctcaaaatgaggttggcagtggtggggcaattgataatttgagt
cagcatcaagcccgacttcaagctgcagctgcagcagcagcttcaatatatgagaagtct
tatgtttatccctccccaacatctttagtgtgctctcctgggtacactcttcaaccccca
gttcagatgtctatgggcaaatctgttaacacggcactcaatggagaacaagcttctggt
gaacaggcacaacagcaatttgttctccctggtggaccaatgatatcctttcctcaaatg
gggcccttccattttcttccttcccaaacacgcggagcccctgcgaattatggagtggag
tttggagttgacccaaatatgccaagctctcacctggaagctcatagaaaactacttcaa
tatcagattgagattctgcaaaatcagctcaagcttttgcagaggacaaaggttgaaaca
ggtgtagatgagggtacatcttcatcatccacatcgacagcagatagcagaggcaagcaa
atagcatcgagtcatgagattcatcgtgaaaaagaataa
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