KEGG   Arachis hypogaea (peanut): 112722282
Entry
112722282         CDS       T07294                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ahf  Arachis hypogaea (peanut)
Pathway
ahf03030  DNA replication
ahf03410  Base excision repair
ahf03420  Nucleotide excision repair
ahf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ahf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112722282
   03410 Base excision repair
    112722282
   03420 Nucleotide excision repair
    112722282
   03430 Mismatch repair
    112722282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahf03032]
    112722282
   03036 Chromosome and associated proteins [BR:ahf03036]
    112722282
   03400 DNA repair and recombination proteins [BR:ahf03400]
    112722282
DNA replication proteins [BR:ahf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    112722282
  DNA Replication Termination Factors
   ELG1-RFC complex
    112722282
Chromosome and associated proteins [BR:ahf03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    112722282
DNA repair and recombination proteins [BR:ahf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     112722282
  Check point factors
   HRAD17(Rad24)-RFC complex
    112722282
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 nSTAND_NTPase5 AAA_14 AAA_22 Mg_chelatase AAA_lid_RFC1 Rad17 Viral_helicase1 AAA_16 RuvB_N RCF1-5-like_lid AAA_11 AAA_19 AAA_5 nSTAND3 AAA_assoc_2 RNA_helicase MeaB DNAX_ATPase_lid AAA_30 AAA_25 AAA_28 ABC_tran ResIII AAA_3 IstB_IS21 AAA_18 AAA_24 KTI12 DO-GTPase1 NPHP3_N SLFN-g3_helicase bpMoxR NTPase_1 T2SSE AAA_7
Other DBs
NCBI-GeneID: 112722282
NCBI-ProteinID: XP_025629055
LinkDB
Position
11:complement(87080629..87084565)
AA seq 331 aa
MASSSSNNSSYDVPWVEKYRPSKVSDVVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKT
TSILALAHELLGSNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEA
DSMTSGAQQALRRTMEIYSNTTRFALACNTSSKVIEPIQSRCAIVRFSRLSDEEILGRLM
VVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQQNVFKVCDQPHPLHV
KNMVRNVLEGNFDEACLGLKQLYDLGYSPTDIITTIFRIIKNYDMAEYLKLEFMKETGFA
HMRICDGVGSYLQMCGLLAKLSLVRETAKAA
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcatcgtcatcgtcaaacaacagcagctacgatgttccctgggttgagaagtaccga
ccctctaaggtctccgacgtcgttggcaaccaagatgccgtctcgcgccttcaagtcatc
gcccgagacggcaacatgcccaatctcatcctctctggtcctcctggaactggtaaaacc
acaagcatactagcacttgctcatgagcttcttggttccaattccaaggaagccgttctt
gagctcaatgcttccgatgaccgtggaattgatgtcgtccggaacaagatcaagatgttt
gctcagaagaaagttactctccctcctggccgccacaagattgttattctcgatgaagct
gatagtatgacttcgggggctcagcaagctttgaggaggacaatggagatatactcgaat
actactcggtttgcccttgcttgcaacacttcctctaaggttattgagcccattcagagt
agatgtgccattgtgcgattttcgcgcttgtctgatgaggagatactcggtcgcctcatg
gttgtggttcaagctgagaaggttccctatgttcctgaaggccttgaagccatcattttc
actgctgatggtgatatgaggcaggcgttgaataacttacaagcaacatacagtggattc
cagtttgttaaccaacaaaatgttttcaaggtttgtgaccagccgcatccattgcatgtg
aaaaatatggtgcgtaatgttctcgaagggaattttgatgaggcttgtttgggcctcaaa
caactatatgacttaggatactcccccacagatatcatcacaacaattttccgtattata
aaaaattatgatatggctgagtatctgaaattggaattcatgaaggaaactggatttgct
catatgagaatttgtgatggggttggttcctatcttcaaatgtgtggtctattggccaag
ctttctctagttcgtgaaacagctaaagctgcatga

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