Arachis hypogaea (peanut): 112722590
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Entry
112722590 CDS
T07294
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B isoform X1
KO
K07466
replication factor A1
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03030
DNA replication
ahf03420
Nucleotide excision repair
ahf03430
Mismatch repair
ahf03440
Homologous recombination
ahf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112722590
03420 Nucleotide excision repair
112722590
03430 Mismatch repair
112722590
03440 Homologous recombination
112722590
03460 Fanconi anemia pathway
112722590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahf03000
]
112722590
03032 DNA replication proteins [BR:
ahf03032
]
112722590
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112722590
Transcription factors [BR:
ahf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112722590
DNA replication proteins [BR:
ahf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
112722590
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
112722590
MMR (mismatch excision repair)
112722590
DSBR (double strand breaks repair)
HR (homologous recombination)
112722590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Rhabdo_glycop_CD
Motif
Other DBs
NCBI-GeneID:
112722590
NCBI-ProteinID:
XP_025629461
LinkDB
All DBs
Position
11:128510970..128514308
Genome browser
AA seq
620 aa
AA seq
DB search
MAKSVSPDAISTLLANPTPDSSSDLPEIVVQVLDLKQSGNRYMFSASDGKLKLRAILPSS
QYSDVLSGKIQNLGLIRILDYTLNDIPNKSEKYLIVTKCEPVSPALESEIKSEVKNEGGG
IVLKPKQDSAVKIEGGIVLKPKQEVVSKSAAQIVHEQHRNVAPAARMAMTRRVRPLVSLN
PYQGNWTIKVSVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNDAARKFYDKFV
LGKVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEAANEASFVPETKFSFVPIDQLG
PYVNKSELVDVVGVVQNVSPTMSIRRKSNNETIPKRDITIADETKKTVVVSLWNDLATNI
GQELLDMADKSPVVAIKSLRVGDFQGVSLSAISKSVIKIDPEIPEAKKLRCWYDSEGKDA
TMASVGSGSSPSSMNGSRSVYSDRVSLSYITSNLSLGEDKPAFFSLRGYISFIKPDQAMW
YRACKTCNKKVTESIGAGYWCEGCQKNDEQCSLRYIMVVKVADESGEAYVSVFNEEAEKI
VGCSADELDTLKSQEGEDNPFQLKLKQATWVPHLFRVSVSQNEYNNEKRQRITAKTVVPV
DFAAESRLLLEDISKMRASQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatccgtgagccccgacgccatttccactctgcttgcaaatccaacaccggat
tcctcctctgatcttcccgaaatcgttgtgcaagtcctcgatctcaagcaaagtggcaac
agatacatgtttagtgctagtgatggaaaattgaagctgagggcgattttgccctcgagt
cagtactctgatgtgctctctggcaagattcagaacctcggccttattcgaatccttgat
tacactctcaatgatatccccaacaaatctgaaaagtatcttattgttaccaaatgcgaa
cctgtgtctcctgctcttgaatcagagataaagagcgaggtgaaaaatgaaggtggtggc
attgttctgaagccgaagcaagacagtgcggtcaagattgaaggtgggattgtgttgaag
ccaaagcaggaagtggtgtcaaaatctgctgctcagattgtgcatgaacagcatagaaat
gttgcacctgctgcgagaatggccatgacgcgtagggtgcgtcctcttgtttcattgaac
ccttatcagggtaattggactatcaaggttagtgttacgagcaaagggaacatgcgcacc
tataagaatgctcgaggagaaggttgtgtctttaatgtggagttgacagatgaagatggc
acacagattcaagcaaccatgtttaatgatgctgcaaggaagttctatgacaagtttgtt
ttgggaaaggtttactacatatcaaagggtactttgaaagttgctaacaagcagttcaaa
actgtacaaaatgactatgaaatgacactgaatgagaattctgaggtagaggaagctgcc
aatgaagcaagttttgttcctgaaacaaaattcagctttgttccaattgatcagttgggt
ccttatgtcaacaaatctgaacttgttgatgttgttggagttgttcagaatgtatctcca
actatgagcataagaaggaagagcaacaatgaaactattccaaagcgtgacattactatt
gctgatgaaacgaagaagacagtagtggtgtcactgtggaatgatctcgcaactaacata
ggtcaagagttgctggacatggctgataaatctccagtagttgcaattaagtctcttcgg
gttggggatttccaaggtgtttctttgtcagctataagcaaaagtgtaattaagattgat
ccagagatacctgaagcaaagaaacttagatgctggtatgactctgaaggcaaagatgct
acaatggcttctgttggctctggctcgagtccttcatccatgaatggaagtagatctgtg
tactctgatcgtgtttcactttcttacataacttcgaacctgtcattgggagaagacaag
cctgcatttttcagccttagaggatacataagcttcataaagccagatcaagcaatgtgg
taccgtgcttgcaaaacttgcaacaagaaagtcactgagagcattggtgctgggtattgg
tgtgaaggttgccagaaaaatgatgaacaatgtagtttaagatacattatggttgtaaaa
gttgctgatgaaagtggggaggcttatgtctcagtcttcaatgaagaagctgagaagatt
gttgggtgctctgctgatgaactagacaccttaaaatctcaggagggagaagataaccct
tttcaactgaaactgaaacaagctacttgggttcctcatcttttccgggttagcgtttct
caaaacgagtataacaatgagaagaggcaaaggatcacagccaagaccgttgttcctgtt
gactttgctgctgagtcaagacttctcttggaagatatatcaaagatgagagcttcacaa
taa
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