Arachis hypogaea (peanut): 112727275
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Entry
112727275 CDS
T07294
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
ahf
Arachis hypogaea (peanut)
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ahf03009
]
112727275
Ribosome biogenesis [BR:
ahf03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
112727275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
WDR54
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
PROPPIN
Beta-prop_LRRK2
Beta-prop_BBS7
Beta-prop_NWD2_C
BCAS3_WD40
Vps54_N
LZ3wCH
DUF4363
Motif
Other DBs
NCBI-GeneID:
112727275
NCBI-ProteinID:
XP_025632742
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Position
12:32070073..32076298
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AA seq
444 aa
AA seq
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MEVVVASSSVDAGIGCWDLYTGAEQLRHKSCSSPPHGLISVGGRFLASSHLSPLSSGGSV
LFWSWSKPQVGVRCFPAETIKPLSANHPGTYIAGGGDSGDIYLWEVETGRLLKKWNAHYR
AVTCLVFSEDDSLLISGSEDGSVRVWSLFMIFDDLRSQEATHLYEHSFTGHALRVTDVVI
GYGGSNAIIVSASEDRTCKVWSLSTGALLRNIVFPAIIDAIVLDPAEHVFYAGSRDGKIF
IVALHTESLVTSNDGMHIVGSFSNHSKSVTCLAYGISGNLLISGSEDGMIRVWNARTHNI
VRMFKYAKGPVSNICVVRPEIDSTSHILQSSSRKQGSDLPPPLEKYANSVEDSDAKTPIV
LCGAKRCAEVSYLSSHAISSHVKELQRHGSAAASELEMEKLKDDYQKSMQMVNQWKKMYE
NLHQFCVKELLDGGQASVSDENNK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgtggtggcttcctcctccgtggatgccggaataggttgctgggatctatat
acgggggcagagcagctccgccacaagtcatgctcctcccctcctcatggcctcatctct
gtcggtggtcgcttcctcgcttcttcacatctctctccactatcctctggcggctctgtt
ctcttctggtcctggtctaagcctcaagttggagttaggtgctttccagctgaaactata
aagcccctttctgctaatcatccaggcacatatatagctggtggaggtgactctggtgac
atatacctttgggaggttgaaactggcagattacttaagaagtggaatgctcattataga
gctgttacttgtctggtattttctgaagacgactctcttctgatttctggttcggaagat
ggttcagtaagagtttggtccctcttcatgatatttgatgatttgagaagtcaagaagca
actcatctctatgagcatagctttacaggtcatgccctacgtgtaactgatgttgtgatt
ggttatggaggtagcaatgccattatagtgtcggcgtcagaggatcggacctgtaaggtg
tggagcttgtccacaggagcattactaagaaatatagtattccctgcaataatagatgcc
attgtattggatcctgctgagcatgtcttttatgctggcagtagagatggaaaaatattt
attgttgcacttcacactgagagccttgttactagtaatgatgggatgcatatcgttggt
tcattttctaaccacagcaagtcagttacttgtttggcatatggcatcagtggaaatttg
ttaatatccgggtcagaggatggaatgattcgtgtttggaatgcaagaactcataacatt
gtccgcatgttcaaatatgctaaagggcctgtaagtaatatttgtgttgttaggcccgaa
atagactcaactagtcatatattacaatcatcatcaagaaagcaggggtccgatttaccc
cctccgttggagaaatatgcaaactcagttgaagattcagatgctaagacacctattgtc
ctttgcggtgccaagagatgtgccgaagtttcatatctcagttctcatgcgatatcttct
cacgtcaaggaacttcagcgtcacggttctgctgctgcctctgaattggaaatggagaaa
ctaaaagatgattaccagaagtcaatgcaaatggttaatcaatggaagaaaatgtatgaa
aacttgcatcaattttgtgtgaaggagctcttagatggtggtcaagcgagtgtttctgat
gaaaataacaaataa
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