Arachis hypogaea (peanut): 112727363
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Entry
112727363 CDS
T07294
Name
(RefSeq) pre-mRNA-processing factor 19 isoform X1
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
ahf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112727363
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112727363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112727363
04121 Ubiquitin system [BR:
ahf04121
]
112727363
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112727363
Enzymes [BR:
ahf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112727363
Spliceosome [BR:
ahf03041
]
Complex B
Other components
Prp19 complex
112727363
Complex C
Prp19-CDC5 complex
112727363
Ubiquitin system [BR:
ahf04121
]
Ubiquitin ligases (E3)
U-box type E3
112727363
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
112727363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_DCAF12
RMC1_N
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
U-box
Beta-prop_ACSF4
zf-Nse
eIF2A
PAS_11
Beta-prop_NWD2_C
TRAPP14_N
PUMA_CC
V_ATPase_I_N
Motif
Other DBs
NCBI-GeneID:
112727363
NCBI-ProteinID:
XP_025632864
LinkDB
All DBs
Position
12:44442032..44452777
Genome browser
AA seq
524 aa
AA seq
DB search
MNCSISGEVPEDPVVSKKSGLLFEKRLIETHIADYGKCPITGEPLTLDDLVPIKTGKIVK
PRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLATAERPFPVSANAIPANVSGLSNGKRAAEDDEMAHGGKKMHPGITSAIISE
LTDCNAALSQQRKKRQISTTLAPVESIEAYTQISSHPFHKTNKPGITSLDILYSKDLIAT
GGIDMNAVIFDRPSGQILSTLSGHSKKVTSVKFVAQGESLLTSSADKTVRVWQGSEDGNY
NCKHILRDHTAEVQAVTVHATNNYFVTASLDGTWCFYDLSSGTCLTQVADTSGSSEGYTS
AAFHPDGLIIGTGTTDALVKIWDVKNQSNVAKFDGHTGSVTAISFSENGYFLATAAHDGV
KLWDLRKLKNFRNFAPYDSETPTNSVEFDHSGSYLAVAGSDIRIYQVANVKSEWNCIKTF
PDLSGTGKVTCVKFGPDSKYIAVGSMDRNLRIFGQPSEDTPTES
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaactgctccatttccggcgaggtgccggaagacccagtggtgtctaagaaatccggt
cttctttttgagaagcggttaattgagacgcacatagcggattatggaaaatgtccaata
actggagaaccccttacgttggatgatcttgtaccaatcaaaacaggcaagatagtgaag
cccagaccagtgcaggcagctagcatccctggcatgcttggaatgttccaaaatgaatgg
gatgggttgatgctatctaattttgcattggagcaacaattgcacacagccaggcaagag
ctaagtcatgctttatatcagcatgatgctgcatgtcgagtgattgcaagacttaaaaag
gaacgagatgaagctaggtcattgcttgcaacagcagaaaggccattcccagtgtcagcg
aatgctataccggcaaatgtctctggcttgagcaatgggaaaagagctgctgaagatgat
gagatggcacatggtggaaagaaaatgcatcctggaataacttctgcaataatttctgag
ctaactgactgcaatgctgctctttcccagcagaggaaaaagcgacagatttctacaaca
ttggctcctgttgaatctatagaggcttatacccagatatctagccaccccttccacaaa
acaaacaaaccgggcattacatctcttgacatcctgtattctaaggacttaattgcaact
ggcggtattgatatgaatgctgttatttttgacagaccatcaggacaaatattatctaca
ctcagtggtcattctaaaaaggtaaccagcgtaaagtttgtagctcagggcgaatcgtta
ttaaccagttcagcagataagacggttcgtgtgtggcaaggctcggaggatggtaactat
aactgcaaacacatcctgagggatcatacagctgaggtacaagctgtcactgtccatgcc
accaataactactttgtgactgcttcacttgatggcacttggtgcttttatgatctgtct
tcaggaacatgtctgactcaggttgcagacacttcaggttcttctgaaggctatacttct
gcagcttttcatcctgatgggctcattattggaactggcaccacagatgctcttgttaag
atctgggatgtaaaaaatcagtcaaatgttgctaaatttgatggacatacaggatcagta
actgccatatccttctctgagaatgggtacttccttgcgactgcagctcatgatggtgta
aagctttgggatctacgcaaattaaagaacttccgaaattttgctccgtatgactcagaa
actccgacaaactcagttgagttcgatcacagtggatcttaccttgcagttgcaggctct
gatatcaggatttaccaagtcgcaaatgtgaaatctgaatggaactgtatcaaaactttc
ccagatttatctggaacagggaaagtcacctgtgtaaaatttggtccagattcaaaatac
atagcagtggggtcaatggatcggaatcttcgaatatttggccaacctagtgaagatact
ccaaccgagtcgtaa
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integrated database retrieval system
