Arachis hypogaea (peanut): 112727992
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Entry
112727992 CDS
T07294
Name
(RefSeq) uncharacterized protein isoform X1
KO
K06100
symplekin
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112727992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahf03021
]
112727992
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112727992
Transcription machinery [BR:
ahf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112727992
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
112727992
U7-dependent histone pre-mRNA processing factors
112727992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_2
HEAT_EZ
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
112727992
NCBI-ProteinID:
XP_025633742
LinkDB
All DBs
Position
12:104049592..104062393
Genome browser
AA seq
1333 aa
AA seq
DB search
MVGKAMAPTSREKLANLFNSAKFAGDVTSKLDTLRRLRRQLPPEDPVILAEFLPSLFELL
SDQFSPVRKFVTEMVGEIGLKNTEFLPDIVPVLIEVLDDDTPAVVRQVILLGIDLFRSTL
EKIALQGLYSSDLDSALESAWVWMVKFKDKVYSIAFQHGSGGARLLALKFVEAVIRLYTP
DPNGSLEPTPHQGRPMGFNISWLRRGHPVLNVRDLSTEASHSLGLLLDQLRSPTVKSLSN
SVIIVLIKSLSAIAIDRPTFYGRILPVLLNLEPSSTVVNGVSVTAAHLALKNAFLTCSKC
THPSAAPWRDRLAGALKEMQSDGKADQVFHLISDINGSLEKEKDVEPLIKKEEHAVNSCD
SVHSNLAGKRAGSQNGGDLAEDEDVPIKRVKTTSDLKEPKKELDRGTTNSQDDTPSTAPK
SSKGDVDNGHVQQLVAMFGALVARGEEAVASLEILISSISADLLADVVMANMRHLPYPNS
EGDDELLHDINIIGSDDKAKYPPSFVAGVMSLSSTFPPIASLLGAHQSVSNERSQGDEEV
SASGVDSAAVHSGLILTSENVSSPTDFPSSDASIPGVENGCATVPSNIHDIGNIESGIPG
LDSFGRSDAYSESLAASSLASSEIQHEETNQEQATSLDQRSPLNLVTSVSTDRSEELSPK
AAVADVNSLVSSTATSVVLPSRVVLPKMIAPVVDHSDEQKDQLQKLCFMRIVDAYKQIAV
AGGSQVRFSILAYLGVEFPLELDPWKLLQDHILVDYTGHEGHELTLRVLYRLFGEAEEEP
DFFSSTTAASAYETFLRTVAEALRDSFPPSDKSLSKLLSESPYLPKSVLKILENMCSPGN
GDNIEKESNSLNADRVTQGLSAVWSLILLRPPIRNTCLKIALQSAVHHMEEVRMKAIRLV
ANKLYPLPSISKQIEDFAKEMLCSVTSDASEATDAEGSLADLQKGPDTEKLANETSSMTS
STKDISADNHQSVASESISPESVLEAQRLMSLYFALCTKKHSLFRQIFSIYKSTSKAVKQ
AVQRQIPILVRTMGSSPDLLEIISDPPIGSESLLMQVLHTLTDGTVPSRDLVVTVKQLHD
SKLKDAEVLIPILPFLQKDEVMPAFPNIVNLPLEKFQAALSRMLQGSSQSGPVLTPAEVL
IAIHGVDPERDGIPLKKVTDACNACFEQRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQ
AIGAFPTLVDFIMGILSRLVRKQIWKYPKLWVGFLKCAQLTKPQSFGVLLQLPPAQLENA
LNRIAALKAPLVAYASQPDIQSTLPRSVLVVLGIVSDSQVTSQVQTSQTETAETSNSEKD
TATEKSKESSTAS
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaaaagccatggccccgacctcgcgcgagaagctcgccaacctcttcaactct
gccaagttcgccggtgatgtaacttccaagctcgatactctccgccggttgcggcgccaa
cttccgccggaggaccccgtaatcctcgccgagttcctcccgtcgcttttcgaattactc
tctgatcaattcagccccgttcgcaagtttgtcaccgagatggttggtgaaattggattg
aagaacacggagttcctgccagacattgtgcctgtgctgattgaagtgttggacgatgac
actcctgctgttgttcgacaagttatattgctgggaatcgatttgtttcgttccacgctt
gagaaaatcgcacttcagggtctatattctagtgatttagacagtgcacttgaatctgca
tgggtatggatggtgaaattcaaagataaagtatactcaattgcttttcaacatggaagt
ggtggtgcaaggctgctggcactgaagtttgttgaagcagttattcgtctttacacacct
gatcccaatggttccttggagcccactcctcatcaaggaaggcccatggggtttaatata
tcatggctgaggcgtggtcatcctgtgcttaatgttcgtgatttgtcaactgaagctagt
cacagtttgggtctcctgcttgatcaactcaggtctccaactgtgaagtctctgagtaac
tcagtgatcattgtgctaattaaaagcctttcagctattgcaatagacaggcctacattc
tatggccgcatcttgccagttttgctcaatttggaaccctcgagcactgttgttaatggg
gtgagtgtaacagcggcacatcttgctttgaagaatgcctttctgacatgctcaaaatgt
acacatccaagtgctgctccgtggagagatcgtttggctggtgccttgaaggagatgcag
tctgatgggaaggcagaccaggttttccacctgatatctgatattaacggaagcttagag
aaagagaaagatgttgaaccacttatcaagaaagaggaacatgctgtaaattcatgtgat
tcagtgcacagtaatttggctggtaagcgagcaggatcacaaaatggaggtgatttagct
gaagatgaagatgtgcctatcaaacgtgtcaaaacaacttctgatttaaaggaacctaag
aaagagttagacagaggtaccactaactctcaggatgacactccttcaacggctccaaaa
tcatcaaaaggagatgtagataatggccatgtgcagcagcttgttgccatgtttggtgct
ttggttgcacgaggtgaagaagctgttgcatccttggaaattcttatatcaagtatttct
gctgacttgcttgccgatgtggtgatggctaatatgcgtcacctaccttacccgaattcc
gaaggagatgatgaactgctgcatgacatcaacattattggttctgatgacaaggctaaa
tatccaccatcttttgtggctggcgtcatgtcactttccagtactttcccaccaatagca
tcacttcttggtgctcatcaatccgtctccaatgaaaggtctcaaggggacgaagaagtt
tctgcaagtggggtagatagtgctgctgtgcattctggactaattcttacttccgaaaat
gtctcctctcctactgactttccgtcctctgatgccagcatacctggagtggagaatgga
tgtgcaactgtgccttctaatattcatgatattggaaacatagagagtggaatccctggc
ctggattctttcggtcgtagtgatgcttattcagaaagtttggctgcttcctcattggcc
tcctctgagattcaacatgaagaaactaatcaagaacaagcaactagtttagatcaaagg
tcaccactaaacttagttacatcagtatctacagatagatctgaggagctcagcccaaaa
gcagctgttgcagatgtcaacagcttggtgtcgtcaactgctacttcggttgtgttgcct
tcccgtgtagtcctgccaaagatgattgcacctgttgttgaccattcagatgagcaaaag
gatcaattgcaaaagttgtgtttcatgcgtatcgttgatgcatataagcaaatagctgta
gctggaggatcacaagtccgattttcaatacttgcttatttaggagtagagtttcccttg
gaattagacccgtggaaactattacaagatcatattttggttgattatactggtcatgag
ggacacgagttgacattgcgtgtcctctacaggttatttggtgaggctgaagaggagcct
gacttcttttcttccacaactgcagcttctgcatatgaaacattcctccgaacggtggca
gaagcacttagagattctttcccaccttcagataaatcattaagcaaactgctcagtgaa
tcaccatatttaccaaaatcagttttgaaaattctagagaacatgtgttctcctggaaat
ggggataacattgaaaaggagtcaaactctctgaatgccgacagagttactcaaggtctc
agtgctgtatggagtttgattcttctgaggcctcccattcggaatacctgcttaaaaatt
gctttacagagtgcagtgcatcacatggaagaagtgcgtatgaaggcaatacgtctggtg
gcaaataagctttatcctttaccatccatttctaagcaaatagaagattttgcaaaagag
atgttgtgctcagtgacaagtgatgcatctgaagctactgatgctgaaggatcccttgct
gatttacaaaagggacctgatactgaaaagcttgcaaatgagacatcatcaatgactagc
agcactaaggacatctcagcagataatcatcaatcagtcgcatctgaaagtatctctcca
gaatcagttcttgaggctcagaggttaatgtcattgtattttgctttgtgtacgaagaaa
cactctctctttcgccaaatattttccatctataagagcacatcaaaagcagtgaagcag
gcagttcagcgtcaaattcctatattagtacgtactatgggctcatctccagatctcctt
gaaattatttcagatcctccaattggtagcgagagcctcctaatgcaggtgttacataca
cttacagatggtacagtcccttctagggatttagtggttacagtgaagcagttgcatgat
tcaaaacttaaggatgcggaggttcttattccaatattaccattcttacaaaaagatgag
gtaatgccagcttttccgaatattgtgaatcttcctttggagaagttccaagcagcgctt
agtcgcatgttgcagggatcatcacaatctggtcctgtgctcacacctgctgaagtttta
attgcaatacatggagttgacccagaaagagatgggattcccttgaaaaaggtcacagat
gcatgtaatgcttgctttgagcaacgacaaacttttacccaggaagttcttgcgaaagtt
ttgaatcaattagttgagcagattcctcttcctttactgtttatgcgtacagtgttgcaa
gcaattggtgcttttccaacgttggtggactttataatgggaattctctcgcggctcgtg
aggaagcagatttggaaatacccaaagttgtgggtgggattcttgaagtgtgctcagttg
acaaaacctcaatcatttggagttttgcttcagctacctccagcacaattggaaaatgcg
ttaaatagaattgcagcactaaaggcaccattggttgcttatgctagccagccagatata
cagtctacacttcccaggtctgtgctggttgttctgggaattgtatcagactctcaggtt
acaagtcaggtacaaactagtcaaacagagactgcagagacatccaactccgaaaaggat
acggcaacagaaaaatctaaagaatcatctacggctagctga
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