Arachis hypogaea (peanut): 112731741
Help
Entry
112731741 CDS
T07294
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15 isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03013
Nucleocytoplasmic transport
ahf03015
mRNA surveillance pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112731741
09122 Translation
03013 Nucleocytoplasmic transport
112731741
03015 mRNA surveillance pathway
112731741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112731741
03041 Spliceosome [BR:
ahf03041
]
112731741
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112731741
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112731741
Spliceosome [BR:
ahf03041
]
Complex C
Other components
EJC/TREX
112731741
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112731741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
112731741
NCBI-ProteinID:
XP_025636668
LinkDB
All DBs
Position
2:complement(1553358..1557685)
Genome browser
AA seq
426 aa
AA seq
DB search
MGELKDTEAYEEELIDYEEEDEKAPDSAKPAAESGKKGYVGIHSSGFRDFLLKPELLRAI
VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPLPGQVAALVLC
HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALT
RDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHEKQVMMFSATLSKEIRPVCK
KFMQDPMEIYVDDEAKLTLHGLVQHYIKLQESEKNRKLNDLLDALDFNQVVIFVKSVSRA
AELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGRQRILVATDLVGRGIDIERVNIVI
NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSTADSEVLNQVQSRFEVDIKELPEQIDT
STYMPN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaattgaaggataccgaggcttacgaggaagagctcatcgactacgaagaagaa
gatgaaaaagcccccgattctgcaaaacctgctgctgaatccggcaagaagggatatgtt
ggcatccatagctcaggattccgagacttcctgttgaaacctgagcttcttcgagctatt
gtcgattcaggattcgagcatccatccgaagtgcaacacgagtgcatccctcaagcaatt
ttaggaatggatgtcatttgtcaagcaaaatctgggatgggaaaaactgcagtttttgtt
ctttcaacacttcagcaaatcgatcctcttcctggtcaagttgcagctcttgttctttgc
catacgagagagctagcttatcagatttgccatgaatttgaaaggttcagcacatatctt
cctgatatcaaagttgctgttttctatgggggtgtcaatattaaggttcacaaagaattg
cttaagaatgaatgtcctcatattgtggttggaacacctgggaggattcttgccctgact
agagataaggaccttggcttaaagaatgtgaggcattttattcttgatgagtgtgacaag
atgcttgaatcacttgacatgaggagagatgtgcaagagattttcaaattgactccccat
gaaaagcaagtcatgatgttttctgctacactcagcaaagagatccgacctgtttgcaag
aaatttatgcaagatccaatggaaatttatgtggatgatgaggccaagttaacacttcat
ggtcttgttcagcactatatcaaattgcaagaatcggagaagaatcgtaagttgaatgat
cttcttgatgctctggacttcaaccaagttgttatttttgtaaaaagtgttagcagagct
gcagagttgaacaagttgcttgtggagtgcaacttcccttcaatatgtatacattctgga
atgtcacaggaagaaaggttgaaacgatacaaaggcttcaaagaagggaggcaaaggatt
cttgttgcaacagacttagtaggaaggggtatcgacatagaacgggttaacatagttatc
aactatgacatgcctgattctgctgacacttacctgcacagggtaggaagagctggtaga
tttggcaccaaggggcttgcaattacttttgtctcttcaacagctgactctgaagttctt
aatcaggtgcaatcaaggtttgaagttgatataaaggagcttccagaacaaattgacacc
tccacatatatgccaaactga
DBGET
integrated database retrieval system
