Arachis hypogaea (peanut): 112734212
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Entry
112734212 CDS
T07294
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03013
Nucleocytoplasmic transport
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112734212
09122 Translation
03013 Nucleocytoplasmic transport
112734212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112734212
03041 Spliceosome [BR:
ahf03041
]
112734212
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112734212
Spliceosome [BR:
ahf03041
]
Complex C
Other components
EJC/TREX
112734212
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112734212
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
FapA
ABPF_N
Motif
Other DBs
NCBI-GeneID:
112734212
NCBI-ProteinID:
XP_025639226
LinkDB
All DBs
Position
3
Genome browser
AA seq
1876 aa
AA seq
DB search
MSLPPIECIYVTEDCVREWKSGNPALRVSEPVPSLRFLYELCWTMVRGELPFQKCKVALD
SVIFSDRPPTEKLASNFADIVTQMAQDHTMSGEFRSRLIKLARWLVESELVPVRLLQERC
EEEFLGEAEMIKIKAQDLKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAP
TQKASAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDNSVFLELIPIFPKSHASQILG
FKFQYYQRMDVSCPVPFGLYKLTALLVKQDFIDIDSIYAHLLPKDEEAFEHYNTFSSKRL
DEANKIGRINLAATGKDLMDDEKPGDVAIDLFAAIDMETDAIEERKSELQNSQTLGLLTG
FLSVDDWYHAHMLFGRLSPLNAVEHIQICESLFRLIERTISSAYDVIRHAHHQNSGSSTG
VSTDPMDVDNSSRRSSFIDLPKELFQMLACTGPYLYRDSILLQKVCRVLRGYYFSALELV
SHGDSALNSQFPGIGNPHLHLKDARLRVEDALGACLLPSLQLIPANPAVGQEIWELMSLL
PYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANP
MTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLS
DWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENL
TEEQLDAMAGSDTLRYQATSFGVTRNNKALLKSTSRLRDALLPKDEPKLAIPLLLLIAQH
RSLIVINADAPYIKMVSEQFDRSHGTLLQYVEFLCSAVTPASNYAALIPSLNDLVHLYHL
DPEVAFLIYRPVMRLFKSQRSPDVCWPLDDNNAANDASTESDLVDHSGSMVLDLGSARNP
ISWQYLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKSRYESEIAKLHASLKSLE
ELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVHRRLSHEKDKWLSSCPDTL
KINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICC
CTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKV
HWKWSQRITRLLIQCLESSEYMEIRNSLIMLTKISGVFPVTRKSGINLEKRVAKIKSDER
EDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPSISKSSAGNSASVQSGISLGVS
QTESGSGKHLDSVNTVKDQTKIKTADSKVERTDSTIAGKSDSGQAKLKGNSSLNGLDAPS
TLPSPAVQSGATKSMENQKQAEESVSRASEEHVPRAAESRASGKRSAPASSHSKPSKQDP
AKEDTRSGKAVARASGSLSSDKDIQNHASEGRHTGSTNLSSSVNANGNSISASAKISAPS
TKGETGSELKAEMGGVKSSDIRASVVKDDGNDVIDSVRGSSSRVVHSPRHDNTIVTSKST
DKAQKRASSAEEPDRLGKRRKAEAEQRDVENEIRLSEREKLVDPRLSDEKLGPEELGLYR
AGDKPLERAKDKGNERYEREHRERLDRVDKSRGDDFIVEKPRDRSIERYGRERSVERMQE
RGSERGFNRLPEKAKDDRSKDDRSKLRYNDVSIEKSHADDRFHGQSLPPPPPLPPNMVPQ
SVGGGRRDEDADRRYGATRHSQRLSPRHEEKERRRSEEAVVSQDDAKRRKEDDFRDRKRE
EREALSLKVEERDRERERDREKTNLLKEELDLNAASKRRKLKREHLPAGEPGEYSPVAPP
PPPLGIGVSQAYDGRDRVDRKGPMIQHANYIDEPGLRIHGKEVASKLNRRDSDPMYDREW
DDEKRQRADQKRRHRK
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgccacccatagagtgtatttacgtaacggaggactgtgttcgcgaatggaag
agtggcaatcctgccctcagggtttccgaaccagttccatcgctacgcttcctctacgag
ctttgctggactatggttcggggtgaattgccgtttcagaagtgtaaagtagcgttagat
tctgtcatattctccgacagaccgccgactgagaaattagcttcaaattttgcagatata
gtgacccaaatggcccaagatcatacaatgtcgggagagtttcgatctcgtctcattaaa
ctggcaagatggcttgtggaatctgaattggttccagttaggctacttcaagaacgttgt
gaggaagagtttttgggggaggctgaaatgatcaaaataaaggctcaggatttgaaggga
aaagaggtcagagttaatacacggcttctttatcaacaaaccaaatttaaccttcttaga
gaagagagtgagggctatgcaaagctggtcactcttctttgccgagattccgaagctcca
actcaaaaggcatctgccgcaacaattggcattattaagtcgttaattggccattttgat
ttggatccaaatcgtgtttttgatattgttcttgagtgttttgaacttcaacctgataac
agtgtgtttctagagctgattcctattttccccaagtctcatgcttcacagattcttgga
tttaagtttcaatattatcagcgcatggatgtcagctgccctgttccctttgggctctat
aagctcacagcgttgctggtgaaacaagattttattgatattgatagcatatatgcacat
ctacttccgaaggatgaagaagcatttgagcattataacactttctcttccaagcggctt
gatgaggctaacaaaattggaagaataaaccttgctgctactggaaaagatctaatggat
gatgagaaaccgggtgacgtcgcaatagatctttttgctgctatagacatggaaactgat
gcaattgaagagcgaaagtctgagcttcaaaacagtcaaactttggggttgcttaccggc
tttctttcggtggatgactggtatcatgcacatatgctgtttggtcgtctgtcaccactc
aatgcagtggaacatatccaaatatgtgagagtttgtttaggctcattgagaggacaatt
tcttcagcatatgatgttattcggcacgcacatcatcaaaactctggatcatccacagga
gttagtactgatcctatggatgtagataactcctcaagacgaagttctttcatagatctt
ccgaaggagctttttcagatgcttgcttgtactggaccctacctttaccgtgactctata
ttgttgcagaaggtttgtagggtgctgagaggttattacttttctgcccttgagcttgtt
agtcatggcgacagtgccttgaattctcaatttcctggaattggaaatcctcatctacac
ctgaaagatgcaaggctaagggtggaggatgctttaggagcttgcctactaccttctttg
caactgattcctgccaatccagctgttggccaggaaatttgggaactaatgagtctcctt
ccttatgaggtgcgatatcgtttatacggtgaatgggagaaagatgatgagcgcatacct
atgctcctagcagcaagacaaacagccaagttggacactagacgcattttaaaacggttg
gcaaaggagaatttgaagcagctaggtcgaatggtcgcaaaactagctcatgctaaccct
atgactgtcctacgaacaattgttcatcagattgaggcatacagagacatgattactcct
gtagtggatgcatttaagtatttgactcagctagagtatgacattttggaatatgttgtg
attgagcgcttggcacttggtggacgtgataagctaaaagatgatggtctaaatttgtca
gattggcttcaatcactagcttcattttggggtcacctgtgtaagaagtacccttcaatg
gaattgcgaggccttttccagtatctagtgaaccagttaaaaaaggggcaaggaattgag
cttgttctattgcaggaacttattcaacaaatggcaaacgtccagtacacagagaacttg
actgaggagcagctggatgccatggcagggagtgacactcttcgatatcaagcaacttct
tttggagtaactcgaaataataaggcattgttaaagtctactagcagacttagagatgca
ttacttcccaaagatgaaccgaagttggcgatccccctcctattgcttattgctcaacat
cgttctctgattgtcatcaatgcagatgcaccatacattaagatggttagtgagcaattt
gatagatcccatggaactcttcttcaatatgtggaatttctttgcagtgcagttactcca
gcatcaaattatgctgcactcattccatcgcttaatgacctggtccacctttaccacctg
gaccctgaggttgctttcttgatatatcgccctgtgatgagacttttcaagtctcagagg
agtcctgatgtttgctggccgttggatgataataatgctgcaaatgatgcatctacagaa
tctgatcttgtagatcattctggcagtatggttctagatcttggctctgctcgaaatcct
ataagctggcaatatctacttgatactgttaaaaccatgctgccttcaaaagcgtggaat
agcctttctcctgatctttatgcaacattttggggcctcacactatatgatttgtacgtt
ccaaaaagtcgctacgagtctgaaatagccaagctgcatgctagtcttaagtctttggag
gagctgtctgacaattcaagctcagcaatcaccaagaggaagaaggaaaaggaaagaatt
caagaatcacttgaccgtctgattagtgaacttcataaacatgaagagaatgttgcatca
gttcataggcggctttctcacgaaaaggacaaatggttaagttcctgtcctgacactttg
aagatcaatatggagtttcttcagcgttgtatatttccacgctgcacattcagtatgcca
gatgctgtttattgtgctatgtttgtgcacacacttcattcgctcggaaccccctttttc
aataccgtcaaccatatagatgtcctgatttgtaagactctacaacctatgatatgttgc
tgcacagaatatgaggcaggcaggcttggtaggtttctgtatgagactttgaagattgct
tactattggaagagtgatgaatctatttatgaacgtgagtgtggaaacatgcctggcttt
gctgtttattatagatatccaaacagccagcgagttacatatggccagtttatcaaggta
cactggaagtggagtcagagaataaccagactattaattcagtgtttggaatctagtgag
tacatggaaattagaaattctctcattatgttgacaaagatttctggagttttccctgtt
actcggaagagtgggataaaccttgaaaaacgggtggctaagattaaaagtgatgaaaga
gaggatcttaaggtgctggcaactggtgttgctgctgcattagctgctaggaagccttca
tgggttactgatgaagaattcggtatgggatatcttgagttgaagcctgcgccatctatt
agtaaatcttctgctggaaattcagcatctgtacaaagtgggataagtcttggtgtttct
caaactgaatctggcagtggaaaacatctggactcagtaaacacagtcaaagaccagaca
aaaataaaaactgcagacagcaaggtagaaagaactgacagcacaatagctggaaaatct
gattctggccaagcaaaactcaagggtaattcatcattaaatggattggatgctccatca
accttaccctcacctgctgtacaatctggagcaacaaaatccatggaaaaccaaaagcaa
gcagaagaatctgtaagtagagcatcggaagaacatgttccgagagctgcagagtcaaga
gcttccgggaaacgttcggcacctgctagctcacactcaaagccctcgaaacaagatcct
gcaaaagaggatactagatctggtaaagctgttgccagagcgtctggttctttgagcagt
gacaaggatatacaaaaccatgcatcagagggaagacacactggaagtactaatttatct
tcttcagtcaatgctaatggtaacagtatttcagcttctgcaaaaatctcagctccatct
actaagggtgagaccggtagtgagctcaaggctgagatgggtggcgtaaagtcttctgat
attagggcttctgtggtgaaggatgatggaaatgatgttattgactcggtaagaggttcc
tcttcacgtgtagttcattctcctaggcatgacaatacaattgttacttcaaagtctact
gataaagcccagaagagagctagttctgctgaagaacctgatagacttggtaaacggcgt
aaagcggaggcggagcaaagagatgtcgagaatgaaatcagattatctgaaagagagaag
cttgtagatcctcgattatctgatgagaaattggggccggaagaacttggtttgtacagg
gcaggggataagccattggaaagggcaaaagacaaaggaaatgaaaggtatgaaagagag
cacagggagagattggaccgtgtggataagtctcgtggagatgacttcattgtggagaaa
cctagggataggtcaatcgaaagatatggaagagaacgatctgttgagagaatgcaagaa
aggggtagtgaaaggggtttcaatagactccctgagaaggctaaggatgatagaagcaag
gatgatagaagtaaattacgatacaatgatgtatctatagaaaaatctcatgcagatgat
cgcttccatgggcaaagcctgcctccaccacccccattacctccaaatatggttcctcaa
tctgttggtggtggtaggcgtgatgaagatgctgataggaggtacggagccactagacat
tctcaaaggctttctccaaggcatgaagaaaaagaacggagacggtctgaagaggctgtg
gtttcccaggatgatgcaaaacgcagaaaagaagatgattttcgagataggaaacgcgag
gaacgagaagcattatcattgaaggttgaagagagggatagagagagagagcgggataga
gaaaaaacaaatcttctaaaggaagagttggatttaaatgctgcatccaagagacgtaag
ctcaagagggagcatctgccagctggtgaacctggggagtactcaccagtggctcctcca
cctccacccctaggaattggtgtttcacaagcttatgatggaagagacagggtagacagg
aagggacccatgatccaacatgcaaattacatagatgaaccaggtctcagaattcatggt
aaagaggtagccagcaagctgaatcgtcgtgattctgatccaatgtatgatcgagaatgg
gatgatgagaagaggcaaagagctgatcagaaacggcggcaccgaaaataa
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integrated database retrieval system
