Arachis hypogaea (peanut): 112734235
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Entry
112734235 CDS
T07294
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112734235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112734235
03012 Translation factors [BR:
ahf03012
]
112734235
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112734235
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112734235
Translation factors [BR:
ahf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112734235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
AAA_22
T2SSE
nSTAND3
AAA_19
ATPase
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
112734235
NCBI-ProteinID:
XP_025639251
LinkDB
All DBs
Position
3:136518779..136527735
Genome browser
AA seq
1196 aa
AA seq
DB search
MLQSYFRFRLTTTTAMSLRPLRPSLPSATSHLIGLRAFHLRPTIASHLRLRPCSVAPTGP
VELEWNDRQRFKQRTVALPFWRQRNSNYGRFAYQDFSSDDESDVELASSRSPAQQQMGES
TLENIDEWRWKLTMLLRNNEEQEVVSREKKDRRDYEQLSALATRMDLYSRQYARVVVFSK
APLPNYRPDLDDKRPQREVILPFGVHREVDTHLRAHLSQKPTKRLGSFDDSLHRSSDAGS
IHTNDGIYEKPVPRIHNSVVKEKILQRRSLELRNKQEDWQGSPDGQRMLEFRRSLPAFKE
KDAFLKVISDNQVIVVSGETGCGKTTQLPQYILESEIEAGRGAGCNIICTQPRRISAMSV
SERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLLVDRTLNGVTHVVVDE
IHERGMNEDFLLIVLKELLPRRPDLRLILMSATLNAELFSSYFDGAPTMHIPGFTYPVRA
RFLEDILEVTGYRLNPYNQIDDYGQEKTWKMQKQALAFRKRKSQIASAVEDALEVADFNG
YSLRTRESLSCWCPDSLGFNLIEHVLSHIVKNERPGAVLVFMTGWDDINSLKDKLQTHPL
LGDPSRVLLLACHGSMASTEQRLIFENPEGGVRKIVLATNMAETSITINDVVFVVDCGKA
KETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLPELL
RTPLQSLCLQIKSLQLGSISEFLARALQPPEPLSVQNAVEYLKIIGALDDNENLTVLGRK
LSMLPVEPKLGKMLILGAIFNCLDPIMTVVAGLSVRDPFVMPADKKDLAESAKAQFSARD
YSDHLALVRAYEGWKEAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFFYLLKDIGLVDHN
SETYSRLSPEEHLVRAVICAGLFPGVSSVVNKDKSIALKTMEDGQVLLYGNSVNGSVPKI
PYPWLVFNEKVKVNAVFLRDSTGISDSVLLLFGGNVSRGGLDGHLKMLGGYLEFFMKPEL
ANTYLRLKGELEELIQKKLLDPMFDTQSHDELLSAVRLVISEDHCDGRFVFGRRATPAPK
VKEATNSKSSAGVEAENFKNQLQTLLNRAGHEVPTYKTRQLKNNQFRSTVIFNGLDFVGQ
PCSNKKQAEKSAAAEALLWLKGDMHSSRDVASHMSVLLKKSNKKDKKTSSKRAKWS
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgttacagagctacttcagattcagactcacaaccacaaccgccatgtccctcaggcct
ctcaggccctctcttccttccgccacgtcccacttaattggcctcagggcctttcacctc
cgccccaccatagcctctcatcttcgtctccgcccatgctccgtggcgccaaccgggccg
gttgagctggaatggaacgacaggcagcgcttcaagcagagaaccgttgctctgccgttt
tggcgtcaacgcaactccaattacggccgttttgcctaccaagacttctccagtgatgat
gaatccgacgtggaacttgcctcttcacgctctccggctcagcaacaaatgggagagtcg
actcttgaaaacattgatgagtggagatggaagctgaccatgcttcttcgcaataacgag
gagcaagaagttgtgtccagggagaaaaaggaccggcgtgattatgagcaactttcagct
ttagctaccagaatggatctatacagccgacaatatgcaagagttgttgtctttagtaaa
gcacctctgccaaattaccgccctgatttggatgataagcgtccacaaagagaggtaatc
ttaccttttggtgttcatagagaagtagatactcatctccgtgcccatctttcacaaaag
cctacaaaaaggctaggttcttttgatgattctttgcatagatcaagtgatgctggaagt
attcacaccaatgacgggatttatgagaagccagtgcctaggatccataattctgttgtc
aaggagaaaatccttcagcgaagaagtttggaactgcgtaataagcaagaggattggcag
gggtctcctgacgggcaaaggatgctcgaatttcgtagaagtcttcctgcattcaaagag
aaagatgcatttttgaaagtcatttcagataatcaggtcattgttgtctcaggtgaaact
ggttgtggtaagaccacacaacttccccagtacatactagaatctgagattgaagctgga
cgtggtgctggatgtaacataatttgtactcagcctagaagaatatctgctatgtctgtt
tctgaaagagttgcagcagaacgtggggagaaattgggagaatctgttggctacaaagtt
cggttggagggtatgaaaggaagggatactcgtcttcttttttgtaccacaggtgtatta
ttgaggagactactagtggataggactctaaatggtgtaactcatgttgttgttgatgaa
attcatgaacgcggaatgaatgaagattttcttttgattgtcctgaaggagcttcttcct
cgccgtcctgatttgagattaattttgatgagtgcaaccttaaatgctgagcttttctct
tcctactttgatggtgctccaactatgcacattcctggttttacatatccagtccgagca
cgttttctggaggatattctggaagtgactggatatcggttgaatccttataatcaaatt
gatgactatggtcaagaaaaaacatggaaaatgcagaaacaagctctagctttccggaaa
agaaagagccaaattgcttctgctgttgaggatgcactagaagttgcagacttcaatgga
tatagtctacgcactcgggagtcattgtcctgctggtgccctgactcacttggttttaac
cttattgaacatgtgctttctcacattgtcaagaatgaaaggccaggtgctgttttggtt
tttatgactgggtgggatgacataaactccttgaaggataagctccaaactcatcctttg
ttaggagatcccagccgtgtcttgcttcttgcatgtcatggatccatggccagcactgag
cagaggttgatatttgaaaaccctgaaggtggggtgaggaaaattgttctggcaactaat
atggctgagactagtattaccatcaatgatgttgtctttgtggttgattgtggtaaagct
aaagagacatcatatgatgcactaaacaacacaccttgtttacttccatcttggatatca
aaagctgctgcccggcagagaagaggaagggctggtcgtgttcaacctggtgaatgctac
catctatatcccagatgtgtttatgatgcttttgctgattatcaattaccagaacttttg
agaacacctttgcagtccttatgtttgcaaatcaaaagtttacaacttggaagcatatct
gaattcttagctagagctctccagccaccagagccgctatcggttcaaaatgctgttgag
tatctgaagattattggggccttggatgacaatgaaaatttgacagttctagggcgcaag
ttgtcaatgcttcctgttgagcccaaactcggcaaaatgctcattctcggcgctatcttc
aactgtttggatcccataatgactgttgttgctggtcttagtgtaagggatccatttgtg
atgccggctgacaagaaggatcttgcagagtctgctaaggcccagttttctgctcgagac
tatagtgatcatcttgcacttgtccgagcttatgagggttggaaagaggctgaagctcag
caagctggctatgagtactgttggcgaaattttctttcttctcaaacacttagggccatt
gactctcttagaaagcaattcttttacttgcttaaagatattgggttggttgatcacaat
tctgagacctacagtagattgagtcctgaggagcatcttgtccgagcagtcatctgtgcg
ggtttgtttcctggagtatcatctgttgtgaacaaagataagtcaatagcactgaaaaca
atggaggatggccaggttcttctgtatggtaactctgtaaatggtagtgtacccaagatt
ccatacccatggttggtgtttaatgaaaaggtgaaagtgaatgctgtattccttagggat
tcgactggtatatccgattcagtgctgctcttatttggtgggaatgtatccagaggtgga
ctggatggtcacctaaaaatgttgggaggttatttggaatttttcatgaaacctgaatta
gctaacacttacttgcggttgaagggggagctggaggaactgatacagaaaaaacttctg
gatcccatgttcgatacacaatcgcatgacgagcttctttcagctgttagattggtgata
tctgaggaccactgtgatggcagattcgtgtttggtcgccgggccacacctgcacccaaa
gtaaaagaggcaacaaactccaaaagtagtgctggagtagaggctgagaattttaaaaac
cagcttcagacattacttaacagggctggacatgaagtgccaacttacaaaacaaggcaa
ctgaagaacaaccaattccgttccactgtcatttttaatggcttggattttgttggccag
ccttgcagcaacaagaaacaagcagaaaaatctgctgctgccgaggctcttctatggctg
aagggtgatatgcattcttcacgcgatgttgccagccatatgtctgtgcttttgaaaaag
agcaacaagaaagataagaaaacttcatcaaaacgtgctaagtggagctga
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