Arachis hypogaea (peanut): 112735839
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Entry
112735839 CDS
T07294
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112735839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112735839
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112735839
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112735839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
112735839
NCBI-ProteinID:
XP_072066734
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All DBs
Position
13:27691570..27693073
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AA seq
329 aa
AA seq
DB search
MTTMYTRMTIDDERERLQQPRRVFLMAPPMVVGFPPFYRAVQPRFVERLPLLEPSPNSSV
VIRQVWAANADSEFQIISSLIDKYRFVSVDTEFPGVVILPRNKNYRNLIPEETYQVMKAN
VDALKIIQLGLTLSDQHGNLPDLGTNNRTHYIWQFNFRDFNLMRDIHAKDSVALLRSQGI
DFARNAVAGVSSVHFAKLAAASGLLFNKALTWVTFHGAYDIGYLVKILTWGVLPTSLEEF
LVLVKELFGGNAYDVKHVMRFCNRLYGGLEKVADTLHVDRVAGKCHQAGSDSLLTCHIFH
KIREIYFLANEDGFREYVNVFFGLEIAKS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatgtatacaagaatgacgatcgatgatgaacgagaacgacttcaacaacca
cggagagtttttctgatggcaccgcccatggttgttggttttccgccattttatcgtgct
gttcagccaaggtttgtggagcgactgccgcttctagagcctagtcccaatagttcggtt
gtcattaggcaagtgtgggctgccaatgctgattccgagttccaaatcataagcagcctg
attgacaaatatcgatttgtctccgttgacactgaattccccggcgtagtcatcctgccc
cgcaacaagaactaccggaatcttatcccagaggaaacttaccaagtcatgaaggccaac
gtggatgccctcaaaatcattcagcttggactcactctgtcagaccagcacggcaacctc
cctgacctaggaaccaacaacagaactcactacatctggcagttcaatttccgagacttc
aacctcatgcgtgacatccacgcaaaggactctgtggcactcctacgcagccagggcatc
gactttgcacgcaatgcagtggctggagtttcttcggtgcattttgcgaagttggcagca
gcatctgggctgctgttcaacaaagcacttacatgggtcacattccatggtgcttatgat
attggatatttggtgaaaattctgacgtggggtgttcttccaacaagcttggaggagttc
ttggtgcttgtaaaagagctgtttgggggaaatgcttatgatgtgaagcatgtgatgagg
ttctgcaatcgcctctatggcggtttggagaaggtggctgacacacttcacgtggaccga
gttgctgggaagtgtcatcaggccgggtctgacagcttgctcacctgccacatctttcac
aagattagagaaatttattttttggctaatgaggatgggtttagggaatatgttaatgta
ttttttgggttagaaattgcaaaaagttaa
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