Arachis hypogaea (peanut): 112736581
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Entry
112736581 CDS
T07294
Name
(RefSeq) probable NOT transcription complex subunit VIP2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112736581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112736581
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112736581
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112736581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
112736581
NCBI-ProteinID:
XP_025641876
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All DBs
Position
13:4221573..4227356
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AA seq
651 aa
AA seq
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MSGLLNSSLNGSASNLPDGAGRSFATSFSGQSGAASPVFHHTGSLQGLHNIHGSFNVPNM
PGTLTSRNSTINSVPSGGVQQQTGSLSSGRFGSNNLPVALSQLSHGSAHGHSGVANRGGI
NVVGNPGFSSSTNGVGGSIPGILPTSAAIGNRNAVPGLGVSQILGNAGPRITSSVGNMVG
GGNLGRTGGGLSVPGLTSRHLSANSGSAGLGVQGQNRLMSGVLPQGSPQVISMLGNSYPN
AGGPLSQSHVMGMLNDVNSSDNSPFDMNDFPQLTSRPSSAGGPQGQLGSLRKQGLSPIVQ
QNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHFPMGRSAGFSLGG
TYSSHRTQQQQQHAPSVSSGGVSFSSVNNQDLLHLHGSDIFPSTHSTYHSQASGPPGIGL
RPLNSPNTVSSMGQYDQILQQYQQHQNQSQFRLQMSAVNQSFRDQGMKAMQTAQSTPDPF
GLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFNVP
QCYYAKQPPALHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELHNRGWYYHKENRFWFI
RVPNMEPLVKTNTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPPLPQH
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggctacttaattcttctctgaacggttctgcttcaaatcttccagatggtgct
gggaggtcttttgctacttcattctctggtcagtctggtgcagcctcccctgtctttcat
catactggatcccttcaaggactgcacaatattcatgggagctttaatgtacccaacatg
cctggtacactcacatcaagaaactcaacaataaatagtgtcccatccggtggtgttcag
caacaaacaggtagcctttctagtggaaggtttggttccaacaatctgcctgttgcatta
tctcagctatctcatggaagtgcccatggacactcgggagttgccaatagaggaggtata
aatgttgtaggaaaccctggatttagtagtagcacaaatggagttggaggttctattcct
gggattcttccaacatccgctgcaattggtaaccgaaatgctgttccaggattgggagta
tcccaaattttgggaaatgcaggtcctcgaatcacaagttctgtgggaaacatggttgga
ggggggaaccttggaaggactggtggaggattgtctgtacctggtctcacatcccgtcat
ttgagtgcaaacagtggatctgctggcttaggagtacagggacagaatcgattgatgagt
ggtgtgcttccacaaggatctccgcaggtgatttcaatgctagggaactcttatcccaat
gctggtggtccactttcacaaagccatgttatgggtatgttgaatgatgtaaactcgagt
gataattctccttttgacatgaatgacttccctcaactgactagtcgacctagttctgct
ggagggcctcaaggacaattgggttctttacggaagcagggtcttagtcccatcgttcaa
caaaaccaagagtttagtattcaaaatgaagatttcccagctttgccaggattcaaaggt
ggcaatgctgattatgctatggatatgcaccagaaagaacagcttcatgacaatgctgta
ccaatgatgcaatctcaacatttcccgatggggaggtctgctggttttagcttgggggga
acatattcatcacatcgtacacaacagcaacaacaacatgctccttcggtgagtagtggt
ggtgtctcattttcatctgtaaacaaccaggatcttctccatctacatggatcagatatt
tttccatctacacattcaacttatcattcgcaggcaagtggacctcctgggattggatta
aggccactaaattctccaaatacagtctctagtatgggtcagtatgaccagatcctccag
cagtatcaacagcaccagaatcagtcgcagttccgccttcaaatgtcagccgtaaatcag
tcgtttcgggatcagggcatgaaagctatgcaaactgcacaatccacaccagatccattt
ggtttgcttggcttgttaagtgtgatcaggatgagtgatccagacttgacatctcttgca
cttggaattgatcttactacacttggattaaatttgaattcatcggaaaatctacacaag
acgtttgggtctccatggtctgatgaacctgcaaagggtgatccagagtttaatgtgcca
caatgttattacgcaaagcagccccctgctttacatcaaggttacttttcaaagttttcg
gtggaaacattgttttacatattctacagcatgcccaaagacgaagcacaattatatgct
gcaaatgagctgcacaatagaggttggtattatcacaaagagaatcgtttctggtttata
agagttcccaacatggagccccttgttaaaacgaacacatacgagagaggatcttatcac
tgtttcgatccaaacacatttgaaactgttcgcaaggataactttgttctacattatgaa
atgttggaaaagagaccgcctctaccacagcattga
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