Arachis hypogaea (peanut): 112737990
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Entry
112737990 CDS
T07294
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like isoform X2
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112737990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112737990
Enzymes [BR:
ahf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
112737990
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112737990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RRM_PARN_C
RRM_R3HCC1L
GerD
Motif
Other DBs
NCBI-GeneID:
112737990
NCBI-ProteinID:
XP_025643978
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All DBs
Position
13:33168579..33174627
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AA seq
624 aa
AA seq
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MVSLFQLLFLQQRRSLCTSASPKRWRVKQVNNSNFPESLQEIKAHIAHSDFVAVSMEKTG
SPAPPSWHRLLPFDTVETAYLKASLSAHRFQLLQFAVCPFSISDSNALVAHPYNFLLFPR
DELRMGMPSYSFSCQPSSLASMACQGFDFNACINDGISYLSRVQESVAKIRCGTAFPSFC
VMKSSSISTVADTVFVERIKSRIKHWRKTCKSSGTSGNKDELINSLRNIVRGSEQLRSRP
CLTIDVCSERQVQLIVEMLAEISDDLLPLIIPAKSGSTQAIRVVLANSKEDKDFLERELQ
NAEEEETKKIRGFREVIDLISASQKPVISHNSLNDCTLIHSKFIAPLPPEVDEFVSSMCT
VFPKVLDVNYLIRVIGTKRKVANIPSAISYLNNHFFAPVDVKIPDQGTTNEGKSHGINAL
RLCYLFMKLCSILKVSPYVNESGSKHLAAELEDYANVFHPCAAADIQESPVNEDISIWAK
NTRKVSIDNVVFLWGFKFGTTAGMLKSLLHASHDIFLGEFDVKLVDKSCAIVVFWQPSLS
KQFLDVMNSKEVDGALKELVSDGMRVTCYQTYKTICRLGLWGMDLAESLESGLGSSHSDM
KVDSGSKSSEIHWYNDNIINFDNL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtttcactgtttcagctactattcttgcagcagaggcgttccctttgcacgagcgct
tcccccaaacgatggagagtgaagcaggtcaacaactccaacttccctgaatccctccag
gagattaaggcgcacatcgcgcattccgacttcgtggccgtatccatggagaagacgggc
tcccccgcgccgccctcctggcaccgcctcctcccattcgacacggtggaaactgcctac
ctcaaggccagcctctccgcccatcgcttccagctcctccagttcgctgtctgccctttt
tccatctccgactctaacgccctcgtcgcccatccgtataatttcctgttgtttcccaga
gatgagctgagaatggggatgccctcttacagtttttcatgccagccttcgtcccttgca
tctatggcatgccaaggttttgatttcaatgcatgcataaatgatggcatatcatacttg
tctcgggtgcaagagtcagtggccaaaattcgttgtgggactgcattcccttctttttgt
gtgatgaaatcttcttcaatctctactgttgctgatacagtttttgttgagaggattaag
tcacggattaaacattggagaaagacatgtaaaagctctggtacaagtggaaacaaagat
gagcttataaactcccttaggaatattgtccggggcagtgaacaattaagatcaagacct
tgcttgactatagatgtttgcagtgaacgtcaagtgcagctaattgtggagatgttggca
gaaatttcagatgaccttcttcctttgataatccctgcaaagagtggatccacccaggct
atacgtgttgttttggcaaattcaaaagaagataaggatttcttggagagagagcttcaa
aatgctgaagaggaggagacaaagaaaattcgtggttttcgagaggtgatcgacttgatt
tctgcttcacagaaacctgttatctcccacaatagccttaatgattgtacacttattcat
tcaaaattcattgccccacttccacctgaagtagatgaatttgtgagctccatgtgcacg
gttttccccaaagtacttgacgtaaattatttgataagggtaattggaaccaagagaaaa
gtggccaacatacctagtgctatatcctacttgaataatcatttctttgcacctgttgat
gtgaaaattccggaccaaggtacaacaaatgaaggcaagagccatggaattaatgcatta
aggctatgctatttatttatgaaactttgctcaatattgaaagtttccccatatgttaat
gagtccggcagtaagcatttggcagctgagctcgaagactatgccaatgtatttcatcca
tgtgcagcagccgatatccaagagtcaccagttaatgaggatatcagtatatgggccaaa
aatactaggaaagttagcattgacaatgtggttttcctatggggattcaaatttgggacg
acggcagggatgttgaagagtctactccatgcatcccatgatatatttttgggagaattc
gatgttaaattggtggataagagttgtgccattgttgtattctggcagcctagtttatca
aaacagtttcttgatgtaatgaatagtaaagaagttgatggagccttgaaggaattggta
tcagatggcatgcgagtaacctgttatcagacctacaagacaatatgcaggctagggttg
tgggggatggatcttgcagagtcattagagagcggcttggggagttctcactccgatatg
aaggtggattctgggagcaaatcttcagagattcattggtacaatgacaacataattaac
ttcgataatctttga
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