Arachis hypogaea (peanut): 112738229
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Entry
112738229 CDS
T07294
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112738229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112738229
03009 Ribosome biogenesis [BR:
ahf03009
]
112738229
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112738229
Spliceosome [BR:
ahf03041
]
Complex A
U1 snRNP components
U1 related factors
112738229
Complex B
112738229
Ribosome biogenesis [BR:
ahf03009
]
Eukaryotic type
Pre-60S particles
Helicases
112738229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
112738229
NCBI-ProteinID:
XP_025644360
LinkDB
All DBs
Position
13:43334055..43340404
Genome browser
AA seq
1173 aa
AA seq
DB search
MAAAEAAQAAAGPRYAPDDPTLPTPWKGLIDGSTGLLYYWNPETNVTQYEKPPPLPSGPA
PAASTPNMAPIPVAHAMQSGGMMGQHGQQMLQSSQQQGSNLAQQHGPMMPQQQSSHVASQ
QKPSPVAQGVQQQNLQLAQSMPQPGFNQAGQHSMPHQGQHSMQPQGQYPMQPQGQQMVQP
KGQQMTQQPHQMHYQMQPQGINAQQFGQGASQAQGSHSVQPQAHQFAPQNMHYMPYQPNM
PQPVQQSSQHNMHGHSYENQQDFKSAFPKIEEPEFKNENQVGVSPSNYQQTNQNIPAGVR
SGPSGQVPDGGANAGHSKQFGGAPGSIQQSPSAVPLQQGSSYPVYQHGPSFQNQMGPGMM
HGHPPNVHPGSQKMGHADSFHGRAGNEYYYNSSKEMPAMGPQQPNIAPIPISTKQQDMRM
SSGPFQNVMPSGNGSGIPGHPMHMFPPVGGHPPLSSNPLKGPPYMGSSDVTDMTPAEIYC
QQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAI
AKTGSGKTLGYLMPAFILLRQRRNNPLNGPTVLVLAPTRELATQIQDEAVKFGRSSRFSC
TCLYGGAPKAQQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGF
EPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKAITQYV
EFVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSIGRNYGAAAIHGDKSQSER
DWVLNQFRSGKSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGV
SYTFFSEQDWKHASDLIKVLEGANQHVPPELRQMTLRGPPNFGKERGGMSRFDSGGGGRW
DNGGRGGMRDGGFGGRGGMRDGGFSGRGGMRDGSFGGRGGMRESGFSNDGGMRDGGFGAH
GASGQGGRVDMFGGRGNRGRGFGGPRGGHAGWGRGDRGPNDRFNMDGRGRGRGRGRLDNR
RDVGYRNRGRSRSRSPERVRTWDYSSRSRSRSCSSRSWSRSRSRSRSRSWSRGRSRSRSY
SPSPRRSRSRSRSGRSYSRSRSPRRSPSYDRRDRTDQHHSDQKDYREPEVQAPNPGVSPS
SQGQQNSILGTDQVDQAPLVAGSGVPEDPNALA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcagaggcagctcaagctgccgctggtccacggtatgcacccgatgatccc
accctccctacgccatggaaggggctaattgatggaagcactggtcttttgtactactgg
aaccctgaaactaatgtcacccagtatgagaaacctccccctttgccttcgggccctgct
ccggctgcttctacacccaacatggcgcccatacctgtggctcatgcgatgcaatctggt
gggatgatggggcagcatgggcagcaaatgcttcagtcctctcaacagcaagggagtaac
cttgctcagcaacatgggccaatgatgccacaacagcagagttcgcatgtggcatctcag
cagaagccatctccggttgcacaaggggtgcaacagcagaatttgcagttggcacagtcc
atgccacaaccagggtttaatcaggctggacagcattcaatgccgcatcagggacagcat
tcaatgcagcctcagggacagtatcccatgcaaccccaagggcaacaaatggtccagcct
aaagggcagcagatgacacaacaaccacatcagatgcattatcagatgcagccccaaggt
atcaatgcccaacaatttggtcaaggagcatctcaggctcagggctcacattctgtgcaa
ccacaagcacatcaattcgccccccagaacatgcattatatgccatatcagccaaacatg
cctcaacctgtgcagcaaagttcccagcataacatgcatggtcattcttatgaaaaccaa
caagacttcaaatcagcattcccaaagatagaggaaccagagtttaaaaatgaaaaccag
gttggagtttcgccatctaactatcaacaaaccaatcagaacattcctgctggagttaga
tccggaccatctgggcaagtgccagatggaggtgcaaatgctggtcactcaaaacagttt
ggtggcgcaccaggaagcatacaacagtctccttctgcagtgccattacaacagggtagt
tcttatccagtttaccaacatggtcctagctttcaaaaccagatggggcctggtatgatg
catggtcatccacccaatgtccatcctggaagccaaaagatgggacatgcagatagtttt
catggtagagctgggaatgaatattactataactctagcaaagagatgccagctatgggt
cctcagcagccaaatattgcaccaatacccatttcaacaaagcagcaggatatgagaatg
agcagcggcccttttcaaaatgtaatgcctagtggaaatggaagtggtatcccaggtcat
ccaatgcacatgtttccaccagtaggagggcatccacctctctcaagtaaccccttgaaa
ggacctccgtatatgggatcttcagatgttactgatatgacacctgctgaaatttattgt
cagcaacatgaagttacagcaacgggtgacaacattccacctccttttatgacatttgat
gctactggatttcctccagagattttgagagagatatattctgctggcttctcaaaccca
acaccaattcaggctcaaacttggccagtagcactgcaaggtagggacatagtggcaatt
gcaaaaacaggctctggcaaaacattgggctacttaatgcctgcattcatccttcttagg
cagagaaggaataatcctttgaatggccccactgtcttggttttagctccaacacgtgaa
cttgctacacagatccaagatgaggccgtcaaatttggaagatcttcacgtttctcttgc
acgtgtttgtatggtggagcacccaaagcccaacagctaaaagagttagatcggggagca
gacattgttgttgccacacctggccgactcaatgacatccttgaaatgaagaaaattgac
tttgggcaagtttcactgcttgtgcttgatgaggctgaccgtatgcttgacatgggtttt
gaacctcaaatccggaaaattgttaatgagattccaccacgtaggcaaactctcatgtat
acggcaacatggccaaaagaagtaagaaaaattgccagtgacctgctcgttaatcctgtt
caggttaacattggaagtgttgatgagcttgccgcaaataaagctatcacacagtatgtt
gaatttgtccctcaaatggagaagcagaggcgattagagcagatcctcagatcccaagaa
cggggctctaaggttattattttttgttccacaaagaggttatgtgatcaacttgcccgt
agtattggtcgcaattatggggctgctgcaattcatggtgacaagtctcaaagtgagagg
gattgggttttaaatcagttccggagtgggaagtcaccagttttagttgccactgatgtt
gctgctcgtgggcttgacatcaaggatataagggtggttataaactatgatttccctact
ggagttgaggattatgtacaccgaattggaagaactggacgggcaggtgctactggagta
tcgtacacctttttctcggagcaggactggaaacatgcatctgatttaatcaaagtcttg
gagggtgcaaaccagcatgtgcctccagagctaagacagatgaccttgcgcggaccacca
aactttggaaaagagcggggtgggatgagtcgtttcgactctggtggtggtgggcgttgg
gacaacggtggtcgtggtggcatgagggatgggggctttggtggtcgtggtggcatgaga
gatggtggctttagtggtcgaggcggcatgagggatggtagctttggtggccgaggtggc
atgagggagagtggattcagcaatgatggtggcatgagagatggtggctttggtgctcat
ggtgctagcggtcaaggtgggagagttgatatgtttggtggtaggggaaatagaggtcga
ggatttggtggccctcgtggtggtcatgctgggtggggtagaggggatcgtggtccaaat
gaccgattcaacatggatggaagaggaagagggcgaggacgtgggcgattagacaacaga
agagatgttggatacaggaatagaggcagaagccgtagccgtagcccagagagagtacga
acatgggactatagtagcagaagtcgtagtaggagttgcagcagtaggagctggagccgg
agccggagccgaagcagaagccgcagttggtcgcgtggtcgcagtcggagtcgcagctat
agccctagccctcgtcggagtcgaagccgcagtcgtagcggtcgcagttacagccgcagc
cgaagtccccgtagaagtcccagctatgataggcgtgataggacagatcaacaccattct
gatcaaaaggattatagagaaccagaggtccaagctcccaatccgggagtgtctccaagc
tcccaagggcagcagaattcgattttgggaactgatcaagtggatcaggcgccactggtt
gctgggagtggtgtcccagaagatcccaatgctctggcatag
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integrated database retrieval system
