Arachis hypogaea (peanut): 112738271
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Entry
112738271 CDS
T07294
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112738271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112738271
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112738271
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
IFT57
ATG17_like
Motif
Other DBs
NCBI-GeneID:
112738271
NCBI-ProteinID:
XP_025644426
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Position
13:45584217..45590322
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AA seq
943 aa
AA seq
DB search
MVEAFDDNSNNKLPELKLDTKQAQGFLSFFKTLPNDSRAIRFFDRRDYYTAHGENATFIA
KTYYHTTTVLRQLGSGSDPLSSVSVSRTMFETIARDLLLERTDHTLELYEGSGSNWRLVK
SGTPGNIGSFEDVLFANSEMQDSPVVVALSLNYRENGCTVGLSFVDLTKRVLGMAEFLDD
SHFTNVESALVGLGCKECLLPSESGKSTENRMLCDALTKCGVMLTERKKSEFKTRDLVQD
LGRLVKGSIEPVRDLVSGFEFAPGALGALLSYAELLADESNYGNYTLRRYSLDSYMRLDS
AAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLNVNEINLRLDVVQ
AFVEDTVLRQDLRQHLRRISDIERLVHNLQKRRAGLAHIVKLYQSSIRLPYIKSALERYD
GPFSSMMKSRYLEPLELWTDDDHLNKFIGLVEASVDLDQLENREYMISSSYDPTLTKLKE
QQESLEDQIHKLHRQTADDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLNSQFVV
LETRKDGVKFTNTKLRKLGDQYQQVLEEYKSCQKELVNRVVQTAATFSEVFESLAELISE
LDVLLSFADLASSCPTPYTRPEITSWDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIREK
SWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDNASISVRDCIFARVGAGDCQLRG
VSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEIIKAPTLFA
THFHELTALSLENASDDQQKQIVGVANYHVSAHIDASTRKLTMLYKVEPGACDQSFGIHV
AEFANFPESVVALAREKAAELEDFSPSALSLTDTTNEVGSKRKRVYEPDEMSQGVTKARQ
ILEAFVDLPLETMDKMQALQELRKLKDNLEKDAENCRWLQQFL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagccttcgacgataatagtaataataagctccctgagctcaaattagacacg
aagcaagcccaaggatttctatcatttttcaaaaccctacctaatgactcgagggccatc
cggttttttgatcgcagggactactatactgctcatggtgaaaatgcaactttcattgcg
aagacctactaccacactactactgtcttgcggcaactgggtagtggatcggatcctctt
tcaagtgtaagtgtcagtaggaccatgtttgaaacaattgctcgtgatcttcttttggag
agaacagaccatacccttgaactctatgagggtagtggttctaactggagattggtcaaa
agtggaacgcctggcaatattggcagttttgaggatgttttgtttgctaacagtgagatg
caggattctccagttgttgttgcattatcacttaactatcgtgaaaatgggtgcactgtt
gggttatcatttgttgatttaactaagagagtacttgggatggctgaattccttgatgac
agtcacttcacgaatgtggagtcggcattagttggtcttggctgcaaagaatgccttctg
cctagtgagagtggcaaatctactgaaaatagaatgctgtgcgatgcgttgactaaatgt
ggtgtgatgttaactgagagaaagaaatctgagtttaaaacccgggatctggtacaggat
cttggaagacttgttaaaggttctattgaaccagttcgagacttagtgtctggatttgag
tttgcacctggggctttgggggcattactatcatatgctgagttacttgcagatgagagc
aattacgggaattatactcttcgtaggtacagtcttgacagttatatgagattagattct
gcagccatgagggcactcaatgttcttgaaagcaaaactgatgcaaacaaaaattttagt
ttgttcggtctaatgaataggacctgtacagctggaatggggaaacggttattgcacatg
tggctaaaacagcccttgttgaatgttaatgaaattaacttgagacttgatgttgtacaa
gcatttgtagaggacactgtgcttcggcaagatctgaggcagcatttaagaagaatatca
gacattgagcggttggtacacaatcttcagaagcggagagctggtcttgcacatattgtt
aaactttatcagtcaagtataagactaccttatatcaaaagcgccctagaaagatacgat
ggaccattttcctcaatgatgaagagcaggtacttggaacctcttgagttgtggacagat
gatgatcacctaaataaattcattgggcttgtagaagcgtctgttgaccttgatcaactg
gagaacagagaatacatgatttcctcaagttatgaccctacactaactaaattgaaggag
cagcaggagtcattagaggatcaaatacataaattgcatagacaaactgctgatgatctt
gatctgcctgtagacaaggcattaaagttagacaaggggacacaatttggacatgttttc
agaatcacaaagaaggaagagcccaaaataaggaagaagcttaattcccagttcgttgta
ctggaaacacgtaaagatggagtgaagtttaccaacacaaagctaagaaaacttggggac
cagtatcaacaggtacttgaggagtacaagagctgtcagaaagagttggttaatagagta
gttcaaactgctgcaacattctcagaggtgtttgaatctttagccgaattgatttctgaa
ctggatgtgttattaagctttgctgatttggcttccagctgcccgacaccctatacaagg
cctgaaatcacttcatgggatgaaggagatattattttagaaggcagcagacacccttgt
gtagaggcacaagactgggtgaattttataccaaatgattgtaagcttatcagagaaaaa
agttggtttcaaataataacagggcctaacatgggtgggaaatcaacattcatccgccag
gtgggagtgaatattttgatggcccaagttggctgctttgttccttgtgataatgccagc
atatctgttcgtgattgcatttttgcccgtgttggtgctggtgactgtcaacttcgagga
gtttctaccttcatgcaagaaatgctcgagactgcatcaatattaaaaggagctacagac
aagtccttgataatcattgatgaattgggacgtgggacatcaacttatgatggatttggt
cttgcttgggccatttgtgagcacattgttgaaataatcaaagcacctactttgtttgca
acccactttcatgaactgactgcattatcccttgaaaatgcaagtgatgatcagcagaag
caaattgttggtgttgcaaactatcatgttagcgcacatattgatgcttcaactcgcaag
ctaactatgctatacaaggttgaaccaggagcttgtgaccaaagttttggtattcatgtt
gccgagtttgcaaattttccagaaagtgttgtagccctagccagagaaaaggcagcagag
ttggaagatttttctccctctgcactatccttaactgacaccacaaatgaggttggttct
aagcgcaagagagtatatgaacccgatgaaatgtcgcaaggcgttacaaaggctcgccaa
atccttgaagcgtttgttgatttgcctttagaaaccatggataaaatgcaagctttgcag
gaactaaggaagttaaaagataatttagagaaggatgctgaaaactgtcgatggctgcaa
caattcttgtag
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