Arachis hypogaea (peanut): 112738430
Help
Entry
112738430 CDS
T07294
Name
(RefSeq) regulator of nonsense transcripts UPF2
KO
K14327
regulator of nonsense transcripts 2
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03013
Nucleocytoplasmic transport
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112738430
03015 mRNA surveillance pathway
112738430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112738430
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112738430
mRNA cycle factors
P-body specific factors
112738430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Cytomega_UL84
Xpo1
Motif
Other DBs
NCBI-GeneID:
112738430
NCBI-ProteinID:
XP_025644681
LinkDB
All DBs
Position
13:59953788..59971948
Genome browser
AA seq
1177 aa
AA seq
DB search
MEPQPEEAVARLEELQKSIEAKMTLRQSNLNPDRPDSGFLRTLDSSIKRNTAVIKKLKQI
NEEQRETLMDELRSVNLSKFVSEAVTAICDAKLRSSDIQAAVQVCSLLHQRYKDFAPCLI
QGLLKVFSPGKPGDESDADRNLKAMKKRSTLKLLLELYFVGVIDDGNIFMNIIKDLTGMD
QLKDRDAAQTSLTLLSSFARQGRIFLGLPVSGPEIHEEFFKGLNITADQKKVFRKACYAF
YDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRKSYDHLYRNISSLAEA
LDMQPPVMPEDGHTTRVTTGEEATSAGGKDSSIAEPVWDDEDTRAFYECLPDLRAFVPAV
LLGEAEPKTSEQSVKSQDQPTEIVPESDKGQLGNHDSGDASAESIALPEGGSAEKAKDKE
EREKSKELEREKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEF
CYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLI
NKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGR
FLYRSPETTIRMTNMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLH
QYIRKLLFSDLDKSTIEHVLRQLRKLPWSECEPYLLKCFLKVYKGKYGQIHLIASLAAGL
SRYHDEFAVAIVDEVLEEIRVGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLY
LIVIYGHGTPEQDALDPPEDCFRIRLIITLLETCGHYFDRGSSKRKLDRFLIHFQRYILS
KGALPLDIEFDLQDLFAELRPNMVRYTSVDEVNAALVELEEHDRMVSADKASSEKHSDTE
KPLSRTSSNTVVSNGQRIDNGAEENGVQDDVNDSDTDSGSGTIDAEGHDDEELDDENHDD
GCETEDDDDDDDDGPGPASDEEDEVHVRQKVTEVDPLEEANFEQELKAVLQESMEQRRQE
LRGRPTLNMMIPMNVFEGSTKDHHGRGVGGESGDEALSEETGGNKEVQVRVLVKRGNKQQ
TKQMYIPRDSSLVLSTKQKEAAELQEKEDIKRLVLEYNDREEEELNGLGSQPTNWMLSGG
NRTGGRGNTLEGTSSRSGGRHRHHNYTGSGIYYGRRR
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcagcctgaggaggctgttgcacgccttgaggagttgcaaaagtcaattgag
gcaaagatgacattacgacaaagcaatttgaatcctgataggcctgactcaggattttta
aggactctggattcaagcattaagcgcaatactgcagtcattaagaaactgaagcagatt
aatgaagagcagcgtgaaacactgatggacgagttgcgcagtgtcaacttaagcaaattt
gtcagtgaagctgtgactgctatatgtgatgccaagcttagaagctcagatatacaagca
gcagttcaggtctgctctttgcttcatcagaggtacaaggactttgccccatgcctgatt
caaggacttctcaaagttttctctccaggaaagcctggggatgagtcagatgcagacaga
aacttgaaggcaatgaagaaacgcagtactttgaaacttctattggagctttattttgtt
ggagttattgatgatggcaacattttcatgaatatcataaaagatctaactggtatggat
cagctaaaagaccgagatgcagcacaaactagtttgacccttctttctagctttgcccga
caagggagaatctttctgggacttcctgtttctggtccagaaattcatgaagagtttttt
aaaggccttaacattacggcagatcaaaagaaagttttcaggaaagcatgttatgcattt
tatgatgctgcagcagaactacttcagtctgagcattcttcacttcgactaatggagcat
gaaaattctaagattcttaacgcaaaaggagagctcagtgatgaaaatattgcttcatat
gaaaagcttcggaaatcttatgaccatttgtatcgtaacatctcatcattggcagaggca
cttgatatgcaacctccagtaatgccagaagatggtcacacaacaagagttactactggt
gaggaagctacatctgcgggtgggaaagattcttctatagctgaacctgtatgggatgat
gaagatacaagggctttctatgaatgtttacccgacctaagagcttttgttcctgctgtg
cttttgggcgaagcagagccaaaaacaagtgagcaatcagtgaagagtcaagaccaacca
actgaaatagtacctgaatctgacaaaggtcaactgggcaaccatgacagtggagatgca
tcggcagaatctattgctttgccagagggaggaagtgcagaaaaagcgaaggataaggaa
gaaagagaaaaatcaaaagaattggaaagagagaaggagaaagaaaaagacaatgacaaa
aagggggaaaatgaaaaggacaaactcagaagccttgaggggacaaatttggatgcttta
ttgcaaagacttcctggttgtgtgagccgggaccttatagatcaattgactgtagaattc
tgttatctaaattcaaaatcaaatcggaaaaaacttgtgagggctttgttcaatgtacca
aggacatctctggagctgctaccatattactcacgcatggttgctacactctcaacttgt
atgaaggatgtctcctccattcttttgcagatgttggaggaggaattcaacttcttaata
aataagaaggaccagatgaatattgagacaaagataaggaacatcaggttcataggagaa
ctttgcaagttcaaaattgcccctgctggcctagtctttagttgtttgaaggcctgttta
gatgattttactcatcacaacattgatgtagcttgcaatcttcttgaaacatgtggccgt
tttctataccggtcaccagaaactactatacgtatgacgaacatgttagagatactgatg
cgcttgaaaaatgtgaagaacttagatccaagacatagcactttggtggaaaatgcatat
tacctttgtaagcctccagaaagatctgcacgagtggctaaagtccgtccaccattgcat
cagtatatcagaaaattacttttctctgatctggataagtctaccattgagcatgtgttg
aggcaacttagaaaattaccatggagtgaatgtgaaccatatcttttgaaatgtttcctg
aaggtctataaagggaaatatggccagatccatctgattgcttctcttgctgctggttta
agtcgctaccatgatgagtttgcagtggctatagttgatgaggttttggaggagattaga
gttgggctggaactaaatgactatgggatgcagcaaagacgcattgcctacatgagattc
ttaggggagctttacaactatgagcatgtggattcatctgttatttttgagacactatat
cttatcgtcatctatggccatgggacaccagagcaagatgcactggatccacctgaagat
tgttttcgtataagattgatcattactcttcttgaaacctgtggacattactttgatcgt
ggctcttcaaagaggaaacttgatcgattccttatacacttccagaggtatattttaagc
aaaggtgcactgcctctcgacattgaatttgacttgcaggatctgtttgcggagttgcgc
cccaatatggttagatatacatctgttgatgaagtgaatgcagctctagtagaacttgaa
gaacatgatcggatggtttctgctgataaggccagtagtgaaaaacattctgatactgag
aagcctttgagtaggactagttctaacacagtggtaagcaatggacaacgcattgataat
ggtgcagaagagaatggagtgcaagatgatgttaatgacagtgacactgactcagggagt
ggcaccattgatgcggagggacatgatgatgaagagttggatgatgagaatcatgacgat
ggatgtgagactgaggatgatgatgatgatgatgatgatgggcctggacctgcttctgat
gaggaagacgaagtccatgtgagacaaaaggtgacagaggtggaccctctggaggaagcc
aattttgaacaggagctgaaggctgtgttacaggagagtatggaacagcgaaggcaggag
ctacgaggccgtcctacattgaacatgatgattccaatgaatgtatttgagggatccact
aaggatcatcatgggagaggagttggtggtgaaagtggtgatgaggcattgagtgaggag
accggtggaaacaaagaggttcaagtgagagttcttgtgaagcgtgggaacaagcagcaa
acaaaacagatgtacatcccacgggattcctcactggttctgagtacaaaacagaaagaa
gcagctgagcttcaagagaaagaagacattaagaggcttgtcttggagtataatgataga
gaagaggaggagcttaatggactagggtcccaaccaacaaattggatgttgagtggcggc
aacaggactggtggccgtggcaacactttggaaggaaccagcagtaggagtggcggacgg
catcggcatcacaattatactggcagtggcatctactacggcaggaggaggtaa
DBGET
integrated database retrieval system
