Arachis hypogaea (peanut): 112740969
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Entry
112740969 CDS
T07294
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03440
Homologous recombination
ahf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112740969
03450 Non-homologous end-joining
112740969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahf03032
]
112740969
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112740969
DNA replication proteins [BR:
ahf03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
112740969
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
112740969
BRCA1-C complex
112740969
NHEJ (non-homologous end-joining)
MRX complex
112740969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
SbcC_Walker_B
AAA_15
Rad50_zn_hook
AAA_29
AAA_16
ABC_tran
AAA_22
Motif
Other DBs
NCBI-GeneID:
112740969
NCBI-ProteinID:
XP_025645513
LinkDB
All DBs
Position
Arahy.14:complement(2860376..2874701)
Genome browser
AA seq
1316 aa
AA seq
DB search
MSTVDKMLIKGIRSFDPENKNVITFFRPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
NPHNGEKVCLSYRCADMDKEIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
FSATRYTKALEVIKKLHKEQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQEKTESLKC
QLQELEGSIKDVDDKIHHAEKTLKDLRKLQDQISTKTAQRSTLFREQQKQYAALTEDNED
TDEELMEWKTKFEERIGFLQTKISKLERDLNDIDTKSSFLKQTINDSIWEISKLQTEAEA
HMSLKNERDLCIKNLFAKHNLGPLPESPFTDEVATNLTNRVKSRALDLEKDLQDKKKAND
NKLKMAWDCYMNANDRWKNTEAQKKAKSEIKNGIVRRIEEKENERDSLELQISNVNISHI
DERERNLRIDVERKTNQLAEREFEVNIRQKQSEVYSIEQKIKAVNREKDIMVADSEDRVK
LSFKKAELENHKKKHRKIVDDQKDKIKMVLKGRVPADKDLMKEVSQALRTLGSEYDNQNA
SCNAVKMEVTKLETKETEIKNNLQKHKKDLESKKRRIETELQSLDPQWSCVDSYPKMLES
FKEKRDFTISKYKGNEGIQNSLDHFAKEARTKHACPCCDRAFSAEEEDEFVKKQRSRVAN
SAKVIKALAEESAIADSNYQQLDILRVVYEEYVKLNEETIPDAESKLQQINEELDCKSQE
LDDMLGVLAQIQSDRDVAKALMQHIENADRHFQETIALQKQVEDLEYKLDFRGQGVRTME
EIQLELKSLQGTKDNLHAELEKLREEQRYAENDLSSIQIRWHTLREEKVKAANTLQDAKR
VEEELARLTEEKTNVDLDEKHLAEALRPLSKERDKLLADHDELQVRLNRDYQYLVEQKRI
YQQEAESLFKMTSKIREYSDLKKGDRLKELQEKKSLSESELKSCDARKQAILADINKSKD
LLRDQDNIKRNIEDHLNYRKTKAEVDELGREIETLEESILKVGGVSAIESELQKLSKERE
TLLSELNRYHGTMSVYQSNISKNKIDLKQSQYKDIDKRYFDQLIQLKTTEMANKDLDRYY
NALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT
GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVSKDDLQHSIIECQEIFD
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgttgataagatgctcatcaaaggcattcggagcttcgacccagagaacaag
aatgtcatcaccttcttcagacccttaaccctaatcgttggccccaacggtgctggaaaa
accacaatcatcgagtgcttgaagctttcttgcaccggcgagttgcctcctaatgcaagg
tctggtcacagcttcattcatgaccccaaggttgctggtgaaactgaaacgaagggccag
attaagctccgatttaagacagcagcgggaaaagacgtggtttgcataaggtcctttcag
ctcacacaaaaggcgtcgaagatggaatacaaggcaattgagagtgtacttcaaactatt
aatcctcataatggggagaaagtttgccttagctatagatgtgcagacatggataaggaa
attcctgcgctcatgggtgtttctaaggccattttagaaaatgttatatttgttcatcaa
gatgaagcgaattggccactgcaggatccttccacattgaagaaaaagtttgacgacatc
ttttctgcaactcgatatacaaaggcactggaggttataaagaaacttcacaaggaacaa
gcacaagagataaagactttcaagcttaagcttgagaatcttcaaacattgaaagatgca
gcctataagcttcgtgaaagcattgcccaagaccaggagaaaacagaatctctaaaatgt
cagttacaggagttggaaggaagcattaaagatgtggatgataaaatacatcatgcagag
aaaacactgaaagatttgcgaaagctgcaggaccaaatctcaactaaaactgctcaacga
agcactctgtttagggaacaacagaaacaatatgcagctcttaccgaggataatgaagac
actgatgaagagttgatggaatggaagacaaagtttgaagaaaggattggatttttacaa
acaaaaataagcaaattggagagagacttgaatgacattgacactaaaagttctttcctt
aagcagactatcaatgattccatctgggagatcagcaagcttcaaactgaagctgaagct
cacatgtctttgaagaatgaacgtgatttgtgtattaaaaatctttttgcgaagcataat
ttagggcctcttccagagtcacccttcactgatgaggttgctaccaacctgaccaatcgt
gtaaaatcaagggctttagatcttgagaaggacctccaagataaaaagaaagcaaatgat
aataaactcaagatggcatgggactgctacatgaatgccaatgaccgatggaaaaatacc
gaggctcaaaaaaaagctaaatcagagatcaagaatggcattgttagacgcattgaggaa
aaagaaaatgagcgtgattcactcgaacttcaaatttccaatgtaaacatttctcacatt
gatgaaagagaaagaaatttgcgaatagatgtcgagaggaagacaaaccaactagctgaa
agagaatttgaagtaaatatacgtcaaaagcaaagtgaggtatatagtattgaacaaaag
attaaggctgtcaatcgggagaaggatatcatggttgctgattcagaggacagagtgaag
ctatcttttaagaaagcagagttggagaatcacaagaagaaacatagaaagatagtagat
gaccaaaaggataaaataaaaatggtgctaaaagggagggtccctgctgataaggatctg
atgaaggaagtttctcaagcattaaggactcttggtagtgaatatgataatcaaaatgca
agttgcaatgcggtcaaaatggaagttaccaagttggagacaaaagaaacggaaattaaa
aataatctgcagaaacacaagaaggatttggaatcaaaaaagagacgtattgaaaccgag
cttcagtctttggatcctcagtggtcttgtgttgattcttatcccaaaatgttagagtct
tttaaggagaagagagatttcacaataagcaagtataaaggtaatgaaggtatccaaaac
tcacttgatcattttgcaaaggaagccagaactaagcatgcttgcccttgctgtgaccgc
gccttctctgcagaagaagaagacgagtttgtgaagaagcaaagatcaagggttgctaat
tcagctaaagttattaaagctcttgctgaggagtctgcaattgcagactctaactatcag
cagttggacatccttcgtgtagtttatgaagaatatgtcaaacttaacgaggagacaatc
cctgatgctgaaagtaaacttcagcaaattaatgaggagctggattgcaaatctcaggaa
ctggatgatatgttaggtgttttagcacaaatacagagtgacagagatgtggccaaagca
ttgatgcaacatattgaaaacgctgaccggcattttcaagaaactattgctttgcagaag
caagtagaggatttagaatataagcttgattttcggggacaaggagtgaggactatggaa
gaaattcaattggagcttaaatcattgcagggaacaaaggacaatttacatgctgaattg
gagaagctgagggaagaacagagatatgcagagaatgatctatcaagtattcaaattagg
tggcacactcttagggaggagaaagtcaaagcagctaacacattgcaagatgctaaaagg
gtagaagaagaattagcacgtctgactgaagaaaagaccaatgttgatcttgatgaaaag
catttagcagaagctcttcgacccttatccaaggagagagataaattacttgctgaccat
gatgaactgcaagttagacttaatcgtgattatcagtaccttgttgaacaaaagagaatt
tatcagcaagaagctgaatcactttttaaaatgacttctaaaattagagagtactcagat
ttaaagaaaggggacaggttaaaggaactgcaggaaaagaaatctctatcagagtctgaa
cttaaaagttgtgatgctaggaagcaagcaattttagctgatattaacaaaagcaaagat
ttgttgcgagatcaagataatataaaaagaaatatcgaggaccacttaaattaccggaaa
acaaaggctgaagtagatgagctaggacgtgaaattgaaacactcgaagaaagtatattg
aaggttggtggtgtgtccgcaattgaaagtgaactacagaaattatcaaaggagagagag
acgcttctttcagagttaaacaggtaccatggaacaatgtctgtttaccaaagcaatatt
tccaaaaataagattgatcttaagcagtctcaatacaaggacatagataagcgatacttt
gatcaacttatacagcttaagacaactgaaatggcgaacaaggacctggacagatactac
aatgcacttgataaagcattgatgcgcttccactcaatgaaaatggaagaaatcaacaaa
attataagggaattgtggcaacaaacctatagaggacaggatatagactacattagtatt
cattcagattctgaaggtgctgggacccgttcctacagttacaaggttctcatgcagact
ggtgatgccgagctagaaatgagaggaagatgtagtgcgggccagaaggtccttgcatct
cttatcattcgcttggcgttagctgaaactttttgcctcaattgtggaatattggcactg
gacgagccaaccacaaatttggatggccccaatgctgaaagtctggctgctgctctccta
aggatcatggaagacaggaaaggccaggaaaattttcagctaatcgtaattactcatgat
gagcgttttgctcaactgattggtcagcgccagcatgcagagaaatattatcgagtctca
aaagatgatcttcagcacagtataattgaatgccaggagatatttgactga
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integrated database retrieval system
