Arachis hypogaea (peanut): 112741070
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Entry
112741070 CDS
T07294
Name
(RefSeq) regulator of nonsense transcripts UPF3 isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03013
Nucleocytoplasmic transport
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112741070
03015 mRNA surveillance pathway
112741070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112741070
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112741070
mRNA cycle factors
P-body specific factors
112741070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
112741070
NCBI-ProteinID:
XP_025645676
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All DBs
Position
14:complement(4448946..4456582)
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AA seq
510 aa
AA seq
DB search
MKGALDRTKVVLRHLPPTISEAALLDQIDGTFAGRYNWVSFRPGKISQKHMSYSRAYVDF
KKPEDVIEFAEFFNGHIFVNEKGAQFKVMVEYAPSQRVPRQWSKKDGRDGSIYKDSEYLE
FLELLAKPVENLPSAEIQLEKREAERSGAAKDNPVITPLMDFVRQKRAAKGPRRSLSNGK
VSRRAGTSSNGSSCSASSRRGSGKKRISTTMYVARDTGKGSIGKDKTIYTLVPRQGDQHH
SSKTSTVASSDANQTLDENGVAGNTGSGKKVLLLKGKEREIINGSDLDSLIEQNNVTSSA
KTIVGSTPLKQNQRHEGSARIIRSILSNKEMRQSQSARPQSEQTIPTSDLQKERQPPRPV
HVQLILKGSNGTPENRIGMHDSRNSSERLEKRVRHKDRPDRGVWTNRSIGGDDSLSLSAS
SQVDHLEGHAESKHVTAHVRGGDVKSIASGRGSHSSENGFGKHFGRRGPTHLKDVDGYSV
ANEGKHHRRTSGSHGSHEKQVWVQKASSGT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtgcgttggatcggacgaaggtggtgctgcggcacttgcctcctacgatttct
gaggccgcacttttggaccaaattgacggcaccttcgctggccgctacaattgggtctcc
tttcgtcccggaaaaatcagccagaagcatatgtcctattccagagcttacgttgacttc
aaaaagccagaggacgttatagagtttgctgagttctttaacggccacatctttgtaaat
gaaaagggagcacagttcaaagtcatggttgaatatgctccttcacaacgtgttcctaga
cagtggtctaaaaaggatggccgcgatgggtccatatacaaagattctgagtatctggag
tttcttgaacttcttgccaagcctgttgagaatcttcccagtgctgagatacagttggag
aaaagggaagcagaacgatcaggtgctgcaaaagataatcctgtaattacaccattgatg
gactttgtgcgtcagaaaagagctgccaagggacctcggagatcactttctaatggaaaa
gtgagtagaagagctggcacatcatcaaatgggagtagttgttctgcctcgtcaagacga
ggttctggaaagaagaggatttccaccacaatgtatgttgcaagagacacagggaaaggt
tccattggaaaagacaaaacaatttacactttggttcccaggcaaggtgatcagcatcat
tcaagtaaaacttcaactgtggcttcatcagatgcaaaccaaacactggatgagaatgga
gttgctggaaatactggttccgggaagaaggtcctgcttcttaaagggaaggaaagagag
ataattaatgggtctgatttagatagtttaatagagcagaataatgtaacatcttcagcc
aaaacaattgttggctcaacacctctgaagcagaatcagaggcatgaaggtagtgcaagg
attattagaagcatactctcaaacaaggaaatgcgccaaagtcagtcagccaggcctcaa
tcggagcagacaataccaacatctgatctacaaaaagaaagacaaccacctcgccctgta
catgtgcaattgattttaaagggttctaatgggacaccagagaataggattggcatgcat
gattcacgtaattcaagtgagaggctggagaaacgtgttaggcataaggatagacctgat
cgtggtgtatggacaaatcgttccattggaggcgatgattctttatcattgtctgcttcc
tcacaagtagaccatttggaaggtcatgcagagtcaaaacatgtgacagcacatgtaaga
ggtggggatgtaaaatcgatcgcaagtggtcgtggcagtcattcctcagaaaatggcttt
ggtaaacattttggtcgccggggaccaacacatctgaaggatgttgatggctattctgtt
gcaaatgagggaaagcatcatagaagaactagtggctcacatggttcccacgagaagcag
gtttgggttcagaaagcaagttctgggacctag
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