Arachis hypogaea (peanut): 112752104
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Entry
112752104 CDS
T07294
Name
(RefSeq) regulator of nonsense transcripts UPF3
KO
K14328
regulator of nonsense transcripts 3
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03013
Nucleocytoplasmic transport
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112752104
03015 mRNA surveillance pathway
112752104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112752104
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112752104
mRNA cycle factors
P-body specific factors
112752104
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
BRAP2
Motif
Other DBs
NCBI-GeneID:
112752104
NCBI-ProteinID:
XP_025657308
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Position
19
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AA seq
517 aa
AA seq
DB search
MKVRSEREKTKVVIRHLPPSLTQSDLLHHIDNHFASRYNWFSFRPGNTSHKNQRHSRAYI
DFKSPDDVFEFAEFFDGHVFVNERGAQHKAIVEYAPSQRVPRPTTKKDGREGTIYKDPDY
LEFLKFIAKPPEHLPSAEIQLERKEAEQAGANKEGPIVTPLMEYVRQKRSVDIGAQAFPV
TTKGSRSARAAMRGKLGSGNTKRGLEKKKYVQKDNVKDATRKESKDKSAFTVVPRREDQS
AASNIKGISELETLHGIEGPISGIPVTSDSGKKKILLLKGKQREIPITTEGVIKQQSIQS
GNSAGSTTAKQNQRREASGRLIRSILLNSEARQSQPSTVTQHKIQILSSDNGKRPARSLE
SSKLNAEGDSKRSLDEKFVKKDTHGLGSVGEKIEKRTRNKDRPDRGVWTPLRRSDVSHAD
NEQSPSSLIQPTLPESEVKENVTAANRNGESLASIVGRSSTSVENGPQRNFTRRGVSHIG
KDDVAVSLGDGKASKKGGGGHGAHEKQVWVQKSSSGS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtccgttcggaaagggaaaagacgaaagtggtgattaggcatttgcctccgtct
ctgactcaatctgatctcctccatcacatcgataatcacttcgcttctcgctacaattgg
ttttctttccgccccggcaacaccagccacaagaaccagaggcattctcgagcttatata
gacttcaagagtcctgacgatgtttttgagtttgctgagttctttgatggacatgttttt
gtcaacgagagaggtgcgcagcataaagcaatagtagagtatgcaccttctcagcgtgtt
ccaagaccaactacgaaaaaagatggtcgtgaagggactatatataaagatccagactac
cttgagttcctcaaattcattgcaaagcctcctgaacatcttcccagtgcagaaatacaa
ttggaaagaaaagaagctgagcaagctggggccaacaaggaaggacctattgtcacaccc
ttgatggaatatgttcgtcagaaacgttctgttgacattggtgcgcaggctttcccagtc
accacaaaaggtagcagaagtgctagagctgctatgcgaggcaagcttggctcaggcaat
accaaacgaggcttggaaaagaaaaaatatgttcaaaaggacaatgtaaaggatgccact
cgaaaagagtccaaagacaagtcagccttcactgtggtcccccggcgagaggatcaatca
gctgcttcgaatataaaaggaatatctgaacttgaaactttacacggcattgaaggtcca
atttctggaatcccggtgacttctgactcgggaaagaaaaagatccttcttctgaaagga
aaacaacgggaaattcctattaccactgagggtgtgataaagcagcaaagtatacaatct
ggaaattcagctggttcaactactgcaaaacagaaccagaggcgtgaagctagtggaagg
ttgattaggagcatacttctaaatagtgaggctcgtcaaagtcaaccttcaactgtgacc
caacataagattcaaatcttaagttcagataatggaaagcgacctgctcgttctttggaa
agcagcaaacttaatgctgaaggggattccaaaagatctttggatgaaaagtttgtaaaa
aaggatacacatggtttgggtagtgttggtgagaaaatagaaaaacgtacaagaaacaag
gatagacctgaccgtggtgtttggacacctcttcgtcgttctgatgtttcacatgctgat
aatgagcagtcaccatcctcattgatacagcctactcttcctgaatcagaggtaaaagaa
aatgttactgctgcaaacaggaatggggaatctttagcttccatagttggacgtagcagt
acctctgttgagaatggtcctcaaaggaattttactcgccgaggagtttcccatataggg
aaggatgatgttgctgtcagtttaggtgatgggaaggcatccaaaaaaggtggtggtggg
catggtgctcacgagaaacaagtctgggttcagaaatcatcttcaggatcctaa
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