Arachis hypogaea (peanut): 112754736
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Entry
112754736 CDS
T07294
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112754736
09123 Folding, sorting and degradation
03018 RNA degradation
112754736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112754736
03041 Spliceosome [BR:
ahf03041
]
112754736
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112754736
mRNA degradation factors
5'-3' decay
Lsm complex
112754736
Spliceosome [BR:
ahf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
112754736
Complex C
U2 snRNP components
112754736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Gemin7
Motif
Other DBs
NCBI-GeneID:
112754736
NCBI-ProteinID:
XP_025658271
LinkDB
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Position
16:complement(6026121..6029272)
Genome browser
AA seq
138 aa
AA seq
DB search
MHSGLGGASGGNYGITENLHIYVYVYINLSAWFPFSTALSSFVLKMLFFSYFKDLVGREV
TVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPE
GVDVELLHDATRREARGG
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgggcttgggcggggcctcggggggcaattatggaataacagaaaatcttcat
atatacgtatacgtttacatcaacttgagtgcttggttcccattttctactgcactctct
tcctttgttctcaaaatgttgttcttctcgtacttcaaggatttggtgggaagagaagta
acggtggagctcaagaacgatttggccataaggggcactcttcactccgttgaccagtac
ctcaacatcaagctcgagaacactcgcgtcgttgaccaagacaagtacccccatatgctt
tctgtgaggaactgcttcatcagaggttcagtggtcagatacgtgcaattacctccagaa
ggcgtggacgttgaactattgcacgatgccactaggagagaagctcggggtggttaa
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integrated database retrieval system