Arachis hypogaea (peanut): 112755697
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Entry
112755697 CDS
T07294
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15 isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03013
Nucleocytoplasmic transport
ahf03015
mRNA surveillance pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112755697
09122 Translation
03013 Nucleocytoplasmic transport
112755697
03015 mRNA surveillance pathway
112755697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112755697
03041 Spliceosome [BR:
ahf03041
]
112755697
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112755697
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112755697
Spliceosome [BR:
ahf03041
]
Complex C
Other components
EJC/TREX
112755697
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112755697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
112755697
NCBI-ProteinID:
XP_025659734
LinkDB
All DBs
Position
6:complement(111073081..111079538)
Genome browser
AA seq
427 aa
AA seq
DB search
MGETKDEGYEEELLDYEEEDEKAPDSVGTKVNGEAAKKGYVGIHSSGFRDFLLKPELLRA
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
CHTRELAYQICHEFQRFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL
ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR
AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV
INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCANDVDVLNNVQSRFEVDIKQLPEQID
TSTYMPS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaccaaggacgaaggatacgaggaggagcttcttgactacgaagaggaggac
gagaaggcacctgactccgttggaaccaaagtcaacggtgaagctgccaagaagggctat
gttggtatccacagttcaggattcagagacttccttctgaagccagagcttctccgggct
attgtggactctggatttgagcatccttccgaagtgcaacacgaatgcatacctcaggca
atccttggaatggatgtgatttgtcaagctaaatcgggaatgggaaaaactgcagtgttt
gttctttcaactttgcagcagattgaccctgttgcaggacaagtttctgcacttgttctg
tgccacactagggaattggcataccagatctgccatgagtttcagaggttcagcacttac
ttacctgatctcaaggttgctgtcttctatggaggtgtcaacattaaagttcataaggat
ctactgaaaaatgaatgccctcatattgttgttggtacacctggaagaatactagcactg
gctagggacaaggacctttcattgaagaatgttaggcatttcattttagatgaatgtgat
aagatgctggaatcactggacatgagaaaagacgtgcaagacattttcaagatgactccc
catgataagcaagtgatgatgttttctgcaacacttagcaaggaaattcgtcctgtctgc
aagaaatttatgcaagatccaatggaaatttatgttgacgacgaagccaagttgaccctt
catggacttgtgcagcactatattaaattgaaagaggaggaaaagaacaggaagctgaat
gaccttcttgatgcattggactttaatcaagttgtgatctttgttaaaagtgttagcaga
gcagctgagcttgacaaactacttgtggagtgcaactttccatcaatatgtattcattct
ggaatgtcccaggaagaaaggttaaagcgatacaaaggttttaaggagggccacactagg
attcttgtggctacagatttggttggtaggggaattgacatcgaacgcgtgaatatagtt
ataaactatgacatgcccgattctgcagacacttacttgcacagagtaggtcgagctgga
aggtttggcacgaaaggcctagcaattacatttgtttcatgtgctaatgacgttgatgtc
cttaacaatgttcagtccaggtttgaggttgatattaagcaacttcctgagcagattgat
acctctacctacatgccatcttga
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