Arachis hypogaea (peanut): 112756471
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Entry
112756471 CDS
T07294
Name
(RefSeq) DNA mismatch repair protein MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112756471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112756471
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112756471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
Agenet
Tudor_KDM3B
LBR_tudor
Motif
Other DBs
NCBI-GeneID:
112756471
NCBI-ProteinID:
XP_025660861
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Position
16:complement(12889553..12897355)
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AA seq
1286 aa
AA seq
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MRRNTNGRSPLVNQQRQITAFFSKSTSSSPSPSPILSDSKSINNDKTSKLNPNPKLTSAS
PTPPTPSPSNPKPILLVGASSPLYSDDVIGKRIKVYWPLDKAWYEGTVKSFDNATSKHLV
LYDDDEEESLDLSKEKFEWVQDSSSSVKKLKRLRRSCDIPVVRKMVIDDDESDGSPKSVD
DGNCGSDDSDEDWGKNAVDEGAEVEDDVELDNEEDDYEDGAAERSKRKSSAKVEPKKRKM
SGAEKPEPAKKSKNAGEAGGVKGAFKFSVLEPTSTPDTKKISNGVDNVANDDASERFATR
DAQKFRFLREDRRDAKRRRPTDENYDPRTLYLPPDFLRSLSDGQKQWWEFKSKHMDKVLF
FKMGKFYELFEMDAHVGVKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVIEQT
ETPVQLELRRKNGSKDKVVRREICAVVTKGTLTDGELLSANPEAAYLMALTEQHENNANE
VSERIYGVCIVDVATSRIILGQFKDDLECSALCCILSEIRPVEIVKPAEVLSAETEKVLL
KHTRNPLVNELVPNVEFWDAEKTVDQLKRIYRHTDEVSLEDNELGCLPDVLLELVKTVND
NNSALSALGGALYYLKQAFLDEALLRFAHFELLPCSGFGDLASKPYMVLDAAALENLEIF
ENSRNGDSSGTLYSQLNHCVTAFGKRLLRAWLARPLCHIELIKDRQEAIAGLKGVNLPYA
LEFRKALSRLPDMERLLARIFSTSEANGRNANKVVLYEDAAKKQLQEFISALRGCELMLQ
ACSSLGVILNDVKSRLLHHLLTPGKELPDVCLALNHFKDAFDWVEANNSGRVIPHEGVDP
EYDSACKAVKEIESSLSKHLIEQRKLLGDTSITYVTVGKDTYLLEVPENLRGKVPRDYEL
RSSKKGFFRYWTPAIKKFLGELSQAESEKESLLKSTLQRLIGRFCENHTKWRQLVSTTAE
LDVLISLAIARDYYEGPTCRPSFLGMLSTKDSPYLSAKSLGHPVLRSDSLGKGAFVPNDI
SIGGQHDANFILLTGPNMGGKSTLLRQVCLAVVLAQVGADVPAESFDLSPVDRIFVRMGA
KDNIMAGQSTFLTELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHFVRKV
QCRGLFSTHYHRLAIDYYKDPKVSLCHMACQVGSGTIGVDEVTFLYRLTPGACPKSYGVN
VARLAGLPTSVLQKAAAKSKEFEASYGKSRNASLETNSPNQEWVDEMIVVMKMLNKAAAN
LSYQEGGCDSSLHELKSRARELMQRC
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcaacaccaacggtcgatcgccgctggtgaatcaacagcgccaaatcactgct
ttcttctccaaatccacttcttcttctccttctccttctccaattctctccgattccaaa
tccatcaacaacgataaaacctctaagttaaaccctaaccctaaacttacctctgcgagc
cctacccctcccacgccttccccttctaatcccaaacccattcttctcgtcggagcttct
tctcctctatactccgatgacgtcattggaaaaaggatcaaggtttattggcctcttgat
aaagcatggtacgaaggtacggtcaaatcgttcgataatgccacttctaagcatttagtg
ttatacgacgatgacgaagaggaatcgctcgacctttccaaggagaagttcgaatgggtt
caggattcttcatcgtctgtcaagaagcttaaacggttgcgtcgcagctgcgacatccct
gttgttaggaagatggtgattgacgacgatgagagtgatggaagtcccaaaagtgttgat
gatggtaattgtggcagtgatgattcggatgaagattgggggaagaatgcggtggatgaa
ggcgctgaggtggaagatgacgtggagctagacaacgaggaagatgactatgaagatggt
gctgcagagaggtctaaaagaaagtcaagtgcgaaggtggagcccaagaaacggaaaatg
agtggagcagagaaaccggagcctgcaaaaaagagcaagaacgccggggaagctggtggt
gttaagggagctttcaagttctcagtattggagcctacaagtactccggatactaaaaag
atatctaacggcgttgacaatgtggcaaatgatgatgcctctgaaagatttgcgacaagg
gatgctcagaaatttcgctttctcagagaagaccgcagggatgctaaacgaaggcgtcct
actgatgaaaattatgatccaagaactctctatttgcctcctgatttcttaaggagtttg
tcagatggccagaaacaatggtgggagttcaagtcaaagcatatggacaaagttttattt
ttcaagatgggtaaattttatgaactttttgagatggatgcacatgtaggagtgaaagag
cttgacttgcagtatatgaagggggaacaacctcattgtggttttccggagaggaatttc
tcaatgaatgtggagaaacttgctaggaagggttaccgagttcttgttatagagcagact
gaaacacctgtacagttagagcttcgtcgcaagaatggctcaaaagataaggttgtgaga
cgggaaatatgtgcagtggttacaaaaggcacactaactgatggggagttgctgtcagca
aacccagaagctgcgtatttgatggcactgacagagcaacatgaaaacaacgcaaatgag
gtttcagagcgcatttatggagtttgtatagtcgatgttgccacaagcagaatcattctt
ggacagtttaaggatgacttggaatgtagtgctttatgctgcatcttgtctgagattagg
ccagttgaaattgtgaaacctgctgaagtgctcagtgctgaaacagagaaagtactgctg
aagcatactagaaatcctctagtgaatgaattagttcctaatgtggagttttgggatgct
gaaaaaaccgtggatcaattgaagagaatttacaggcacactgatgaagttagtctagaa
gataatgagctaggttgcttgccagatgttttgctggagctggtgaaaactgtcaatgac
aataatagtgcactttcagctcttgggggtgctctatattatctgaaacaggctttctta
gatgaggcattgcttagatttgcacactttgaattacttccatgttctggcttcggtgat
cttgcctcaaaaccatacatggttcttgacgcagcagccttggagaatcttgaaatcttt
gagaatagcagaaatggagattcttcaggcactctgtattcccaattaaaccattgtgtt
accgcatttggaaagagactactaagggcatggcttgcaagaccattatgtcatatagag
ttaattaaggatcgccaggaagccattgctggtttaaagggagttaatttaccttatgca
ctagaatttcgaaaagctttgtcaaggctacctgacatggagcgattgctggcccgcatc
ttctccactagtgaagctaatggaaggaatgctaataaagtggttctgtatgaggatgca
gcaaagaaacaactacaagagtttatttctgctcttcgtggttgtgaactaatgttgcaa
gcatgctcttctcttggcgttattctgaatgatgtcaaatctagactactccatcatctg
ttaacacctggaaaagaacttcctgatgtctgcttggctctgaaccatttcaaggatgcc
tttgattgggtggaagccaataactcaggccgtgtaatacctcatgaaggagttgaccct
gagtatgactcagcctgtaaggcagttaaagaaattgagtccagtttatcaaaacatctt
attgaacaaaggaaattgcttggagacacatctatcacttatgtcactgttggaaaggac
acataccttttagaagtcccagaaaatttgcgtgggaaagttcctcgggactatgagctg
cgttcatctaaaaaaggcttctttaggtactggactcctgctattaaaaagttcctggga
gaactctcccaagctgaatctgaaaaggagtccttattgaaaagtacattgcagagatta
attggacgcttttgtgaaaatcatactaagtggaggcaattggtgtctactacagctgag
ttggatgttttgatcagtttagctattgctcgtgattactatgaagggccaacatgcaga
ccaagttttttaggcatgctatctaccaaagacagtccttacctctctgctaaaagtttg
ggacacccagtccttaggagtgattccttaggaaagggggcctttgtacccaatgacata
tcaattggtggtcaacacgatgccaactttattcttctaactggtcctaacatgggtgga
aagtcaactctccttcgccaagtttgcttggcagtggttttggcccaggtaggggctgat
gtcccagcagagagttttgatttgtcacctgtggaccgtatctttgttcgcatgggtgcc
aaagataatatcatggctggccagagtacatttttaactgagctttcagaaactgcaaca
atgctgtcttcagccactcgtaattcattggtggctcttgatgagcttgggcgtgggacc
tcaacttctgatgggcaagccattgcggaatctgttctagaacattttgtgcggaaggtt
cagtgtcgtggattgttttctacacattatcatcgattagctatcgattattacaaagat
cccaaggtctccctctgccatatggcatgccaagttggtagtggaacaattggcgtggat
gaagtcacctttctttataggctgacccctggtgcatgtcccaagagttatggtgttaat
gttgcacggttggcagggcttccaacttccgtgcttcagaaggctgctgctaagtctaaa
gaatttgaggcctcttatggtaaatctagaaatgcgtctcttgaaacaaactctccaaat
caggaatgggttgatgagatgatagttgtaatgaaaatgttgaacaaggctgctgcaaat
ttgagttatcaggaaggtggttgtgacagctccctccatgaacttaagagtagagcaaga
gaacttatgcagcgatgttaa
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