Arachis hypogaea (peanut): 112756507
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Entry
112756507 CDS
T07294
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112756507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112756507
03009 Ribosome biogenesis [BR:
ahf03009
]
112756507
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112756507
Spliceosome [BR:
ahf03041
]
Complex A
U2 snRNP components
U2 related factors
112756507
Complex B
112756507
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
112756507
Ribosome biogenesis [BR:
ahf03009
]
Eukaryotic type
90S particles
Helicases
112756507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
ResIII
nSTAND3
FtsK_SpoIIIE
ABC_tran
SRP54
AAA_7
Flavi_DEAD
T2SSE
AAA_30
PhoH
AAA_16
AAA_33
AAA_29
Motif
Other DBs
NCBI-GeneID:
112756507
NCBI-ProteinID:
XP_025660897
LinkDB
All DBs
Position
Arahy.16:13446040..13449995
Genome browser
AA seq
722 aa
AA seq
DB search
MGTERNRIACLFDVVDDGTAKMSESGGGATNNNHLINRWTGRPFSQRYFEILEKRKSLPV
WHQKHQFLRTLAHNQILILVGETGSGKTTQIPQFVLNAVDLETPDKCRKMMIACTQPRRV
AAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSSRTVLKYLTDGMLLREAMTDPLLEQYKV
IILDEAHERTLATDVLFGLMKEVLKNRHDLKLVVMSATLEAEKFQGYFSGAPLMNVPGRL
HPVEIFYTQEPERDYLEAAIRTVMQIHMGEPSGDILVFLTGEEEIEDACRKISKEISNLG
DQVGPVKVVSLYSTLPPAMQQKIFEPPPPPLKEGGPPGRKIIVSTNIAETSLTIDGIVYV
IDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQP
QTYPEILRSNLANSVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGTLT
KLGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSMCAMLSAPNCFVRPREAQKAADEAKAR
FGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNQRALKSADNVRQQLVRIMARFSLKLC
STDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSTCLDHKPEWVIY
NEYVLTSRNFIRTVTDIRGGWLVDIAPHYYDLSNFPHCEAKGVLERLYKKKKKGKEEARK
HK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagagagaaacaggatagcgtgcttgttcgacgtggttgacgacggcaccgct
aagatgtcggaatccggcggtggagccaccaacaacaaccacctcatcaatcggtggacc
gggaggcctttttcgcagaggtactttgagattctggagaagaggaagagtcttcccgtt
tggcaccagaaacaccagttcttgcgaactctcgcccataaccagattctcattctcgtc
ggtgaaactggcagtggcaaaaccacgcagattcctcaatttgttttgaatgctgttgat
ttagaaacaccagataaatgcaggaagatgatgattgcgtgcactcagcctcggagagtg
gctgcaatgtctgtttcccggcgtgtggctgaagagatggatgtaacgattggagaagag
gttggttatagtatcagatttgaagactgcagcagttcaaggacagttttgaagtatctc
acagatggtatgcttttaagagaagcaatgacagatccactcttggaacaatataaagta
attattctcgatgaggcacatgaaaggactttggctacagatgtgctatttggccttatg
aaggaagttcttaaaaatagacatgacttaaagttagtcgtaatgagtgcgactctagaa
gctgaaaagttccagggctactttagtggtgcccctcttatgaatgttccaggaaggctg
catcctgttgaaattttttatactcaggaacctgaaagagattacctggaggctgctatt
aggacggtgatgcagatacacatgggcgaaccttctggggatatacttgtttttctaacg
ggagaggaagagatagaagatgcatgccgcaaaatatctaaagaaatttcaaatttggga
gatcaggtgggccctgtgaaagtggtatccctctattccactcttcccccagctatgcag
cagaaaatttttgaaccacctccacctccactaaaggagggtggacctcctggaaggaaa
attattgtgtcaacaaacatagctgaaacctccttaacaattgatggcattgtctatgtt
attgaccctggtttctctaagcagaaggtttataacccacgagttcgtgttgagtcttta
ttagtgtcaccaatatcaaaagcaagtgcgcatcagagatcaggacgtgctggaagaact
caaccagggaaatgttttagactttatactgagaaaagtttcaataacgatctacagcct
cagacctatcccgaaattttgagatcaaatcttgccaactctgttcttaccttgaagaaa
ctgggtatagatgatttagtgcattttgatttcatggaccctcctgcccctgagaccttg
atgcgtgcattggaagtgttgaattacttgggagcactggacgatgatggtaccttaaca
aagttgggagagattatgagtgaatttcccttggatccacagatgtcaaagatgcttatt
gtgagtcccgaattcaactgttcaaatgagattctgtcaatgtgtgccatgctttcagcc
cccaattgctttgtccggcctagggaagcacaaaaagctgctgatgaagctaaagctagg
tttgggcacattgatggggatcatctcacactcttgaatgtctaccatgcatacaagcaa
aataatgaggatccctcttggtgctacgataactttgttaatcaaagggcactgaaatca
gctgataatgttagacaacagttagtgcgtatcatggcccggtttagcctcaagttatgc
agcaccgacttcaatagtcgtgactactacatcaacataaggaaagctatgttagctgga
tatttcatgcaggtagctcatctggagcgaacaggacattacttgacagtgaaagacaat
caggtggtgcatttgcatccatcaacttgtcttgaccacaaacctgaatgggttatctat
aatgaatatgttcttactagtcgaaattttattcgcactgtgacggacattcgtgggggg
tggttggttgatatagcaccacactactatgatttgtcaaattttcctcattgcgaggcc
aagggtgttcttgagagactctacaagaagaaaaagaagggaaaggaggaagccaggaag
cacaaatga
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