Arachis hypogaea (peanut): 112758581
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Entry
112758581 CDS
T07294
Name
(RefSeq) endoribonuclease Dicer homolog 1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ahf
Arachis hypogaea (peanut)
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ahf03036
]
112758581
Chromosome and associated proteins [BR:
ahf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112758581
microRNA pathway
RISC loading complex
112758581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
dsrm
Helicase_C
DND1_DSRM
DEAD
ResIII
Dicer_dsRBD
Dicer_PBD
SNF2-rel_dom
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
112758581
NCBI-ProteinID:
XP_025663074
LinkDB
All DBs
Position
16:complement(24778286..24789372)
Genome browser
AA seq
1982 aa
AA seq
DB search
MEGGNRVPGSGEGDPSYWLDACEDISCDFIDFDVSSIVSEQPDNASNQDFFGGIDRILDS
IKNGGGLPLDAESNSNAPAEPAAAAAPPPPQQPWLPHDAPPSAAAHSKLQHSLTPLPASN
GSAKNELVAEKHGRTADAFQHPRAETNGCNKLLNGNDEGRVLVGCFVENGGLSRGRDQLR
EYDVDGEERYCKRARLGNYKNDRHYSGRVNYQFKEKERCFNRKRPRDSRDEIDVRRDKDS
SRKKEHYGNCGWRDVRDRDWRDREQRGYWERDKLGSNDMVFRMGTWEADRDREEKMANDT
KQESNGKLDKTSEEAKERVPEEKARQYQLDVLEQAKTKNTIAFLETGAGKTLIAVLLIKS
IHESLQKQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREF
DTKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKENR
PSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELERHVPMPSEVVVEY
DKAGSLCYLHEQIKQMEVEVEEAAKSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESD
GAANLIQKLRAINYALGELGQWCAFKVAQSFLAALQNDERANYQLDVKFQESYLSKVVSL
LKCQLSEGAVSDKHAEVDDSKHETTCNGTEPEEIEEGELPDSHVVSGGEHVDVIIGAAVA
DGKVTPKVQALIKILLKYQNTEDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGH
NNSQEMRTYQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR
GRARKPGSDYILMVERGNLSHEAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDTR
PGTVYQVKSTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMEKHEKPGCPTEYSCKL
QLPCNAPFENLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEREKAEQN
DEGDPLPGTARHREFYPEGVADTLKGEWILSGKDAYNNSKLFHLYMYSVECENVGISKDP
FLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFRGSIDISESQLATLKSFHV
RLMSIVLDVDVEPSTTPWDPAKAYLFVPMISDKSVDPVKQIDWFLVETIIGSDAWKNPLQ
KARPDVYLGTNERTLGGDRREYGFGKLRHGMVFGQKAHPTYGIRGAVAQFDVVKASGLVP
NRDAMQTQKHISLTTKGKLMMADTCTNAEDLVGKIVTAAHSGKRFYVDSIRYDMSAENSF
PRKEGYLGPLEYSSYADYYKQKYGVDLIYKQQPLIRGRGVSYCKNLLSPRFEHSEAHEGE
SEESHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLRNMINYPVQA
LKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNM
VLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGESTLFDQDTSISNTERMDC
HTDEYEDELEDGELESDSSSYRVLSSKTLADVVEALIGVYYVQGGKSAANHLMNWIGIQI
EFDPDEMDCARKPFNVPESILRSVDFDALEGALNMKFKDRGLLVEAITHASRPSSGVSCY
QRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHNLHVHLRHG
SSALEKQIKEFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGSIFLDSGRDTTIV
WKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYRASRVGNLATVEVFIDGVQVGA
AQNPQKKMAQKLAARNALAALKEKEVAKNQKNDENGKKNGNQTFTRQTLNDICLRRNWPM
PFYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKL
YS
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgggaatagggttccggggtcaggggagggtgacccttcttactggctggac
gcctgtgaggacatatcatgcgatttcattgattttgatgtgtcttcaattgtgtctgag
cagcctgacaacgcttccaaccaggatttctttggtgggattgatcgaatccttgatagc
ataaagaatggtggtggcctcccgcttgatgccgaatccaattccaatgctcctgctgaa
ccagctgcagcagcagcaccaccaccaccacaacaaccatggttgcctcatgatgcccct
ccttctgcagcagcacactccaagctgcagcactctctgactccacttcctgcctccaat
ggttccgcgaagaatgaattggttgcagagaagcatggtcgcacggcagatgcttttcag
catccacgggctgaaactaacggctgcaataagttgttgaatggtaatgatgaagggaga
gttttggttggttgttttgtggaaaacggaggcctgagcagagggcgcgatcagttgagg
gaatatgatgttgatggtgaagagagatactgcaaaagggcgaggcttggcaactataag
aatgacagacattattctggtagagttaattatcaattcaaggagaaagagagatgtttt
aataggaagaggcctcgagatagtagagatgagattgatgttaggagggacaaagatagt
agcaggaaaaaagaacattatggcaattgtggctggagagatgttagagatagggattgg
agggatagagagcagaggggttactgggagagggataaattgggttctaatgacatggtt
tttcgcatgggcacttgggaagccgatagggatcgagaagagaaaatggctaatgacaca
aaacaggaaagcaatggaaagcttgacaagacatctgaggaggctaaggagagggttcct
gaggagaaagctagacagtatcaattggatgttcttgagcaggcaaagacgaagaatact
atagcttttcttgaaactggagcagggaagaccctcattgcagttcttctcatcaaaagt
atacacgagagtttgcaaaagcaaaataagaaaatgcttgcagtatttttagttccaaaa
gtcccacttgtttaccagcaagctgaagtaattcgtgagcggactggctatcaagtgggt
cattactgtggagaaatgggtcaggatttctgggatgctcgaaggtggcagcgtgaattc
gacactaaacatgtcttagtcatgacagctcaaattcttctgaacatcttgaggcatagc
atcattaaaatggaagcaatcaatctcctaattcttgatgagtgccatcatgctgttaag
aaacatccatattcgctggtgatgtctgagttctaccacacaactcctaaagagaacagg
ccatctgtatttggaatgactgcttctcctgtaaacttgaagggagtctccagccaagta
gattgtgcaataaaaattcgaaatcttgagagcaagctggattcaatagtttgtaccatt
aaagatcgcaaggagctggagagacatgtgcccatgccctctgaagttgtggtggagtat
gacaaagccggcagtttatgttatctacatgagcaaataaagcagatggaggttgaagtt
gaagaagctgcaaaatcgagttcaaggagaagcaaatggcagtttatgggagctagagat
gctggcgcaaaggaggagctgcgacaagtatatggtgtttctgagagaacagaaagtgat
ggagctgcaaacctaattcagaagttgagagctatcaattatgcacttggtgaactgggg
cagtggtgtgcatttaaggttgcacaatcttttctagcagctttgcagaatgatgaaagg
gctaactaccaactagatgtcaagtttcaggaatcttatcttagcaaagttgtctctctt
ctgaaatgtcagttgtcagagggtgcagtttctgacaaacatgctgaagttgatgactca
aagcatgaaacaacttgcaatgggactgaacctgaagagattgaggaaggagaacttcca
gacagtcatgttgtctctggtggggagcatgtggatgtcataataggagcagctgtggct
gatggaaaggtgacccccaaggtgcaggcactcatcaaaatactactgaagtatcagaac
acagaagacttccgtgcaatcatctttgttgagcgtgttgtgtctgcattagttctaccc
aaggtctttgcagagctcccatctcttagttttgtgaaatgtgcaagcttgattggtcac
aacaatagtcaggaaatgcggacctaccaaatgcaggatacaattgccaagttccgtgat
gggagggttacattgttagttgctactagtgttgctgaagaagggcttgatatccggcaa
tgcaatgtcgttattcgctttgaccttgcaaagactgttctggcatacattcaatctagg
ggtcgtgctagaaagcctgggtctgattacatcctgatggttgagaggggaaatttgtca
catgaagcattccttaggaatgcaagaaacagcgaggagaccttacgcaaagaagcaata
gagagaacagaccttagtcatctgaaagacacttcaagattgatttcagtagatacccga
ccgggaacagtttaccaggtcaagtcaaccggggcagttgtgagcttaaattctgctgta
ggtcttatccacttctactgttcccaactaccaagcgacaggtattcaattcttcgccct
gagtttatcatggagaagcatgaaaaaccaggatgtcccactgaatattcttgcaagctt
caactaccttgtaatgcaccatttgaaaatcttgagggtcctatctgcagttcaatgcgt
ctggcacaacaggctgtttgtctggctgcttgcaagaaattgcatgagatgggagcattc
actgacatgctattgccggacaaaggaagtgggggagaaagagaaaaggctgagcaaaat
gatgaaggggatccacttccagggactgctagacacagggagttctatcctgaaggtgtg
gctgacacactgaagggagaatggatcttatctggaaaagatgcttacaacaattccaaa
ttgtttcatctttatatgtattccgtggagtgcgaaaatgtaggaatttcaaaggatccg
ttcttaactcaagtttcagattttgcagtactttttggcaatgagctggatgcagaggtg
ttatcgatgtcaatggatctatttatcgctcgaactgtgactacaaaggcatctcttgtc
tttagagggtcaatagatatcagtgagagtcagttggcgaccttgaaaagctttcatgta
aggttaatgagcattgtcttggatgtggatgttgaaccttctaccactccttgggatccc
gcaaaagcatatttatttgtcccaatgattagcgataagtctgtagatcctgtgaaacaa
attgattggtttctggtcgagacaataattggatcggatgcatggaaaaatcccctccag
aaggctcggccagatgtttaccttggtactaatgagagaactttaggtggagacagaagg
gagtatggatttggaaaattgcgtcatggcatggtgtttgggcaaaaagcacatccaacc
tatggaatcagaggagctgtagcccagtttgatgtggtaaaagcttcaggattggttcct
aacagagatgccatgcaaacacaaaaacatatcagtttgacgaccaaaggaaaattgatg
atggcggatacttgtactaacgcagaggatctggttgggaaaattgtaactgctgcacac
tctgggaagaggttttatgttgattcaatacgttatgatatgtctgcagagaactctttc
cctaggaaagaaggttatcttggtcctctcgagtacagttcatatgctgattattacaag
caaaagtatggggttgatttgatttacaagcaacaaccgcttataagagggcgtggtgtg
tcatactgtaagaatcttctttcccctcgattcgaacacagtgaagcacatgaaggagaa
tctgaagaatctcatgacaaaacatattacgtgttccttcctcctgaactatgcctagta
caccctcttcctggatcacttgttcggggtgcccagagattgccttcaatcatgaggagg
gttgaaagtatgctacttgcagttcagcttaggaatatgataaattatcctgtgcaggct
ttgaagatcttggaggccttgactgctgcatcttgtcaggagacattctgctatgaaagg
gcagagcttcttggagatgcttacctgaaatgggtcgttagtcgatttcttttcctaaaa
tacccgcagaaacatgagggccaacttactaggatgaggcaacaaatggtcagcaacatg
gttttatatcagtatgcattaagtaaaggccttcaatcatatattcaagcagatcgcttt
gccccatcaagatgggcggctcctggggtactgcctgtcttcgatgaggataccaaggat
ggagagtcaactttatttgaccaggatacatccatttctaacactgagagaatggattgt
cacactgatgaatatgaagatgagctggaagatggtgagcttgagagtgattcaagttct
tacagggtactgtccagcaagacacttgctgatgttgtggaagcactcattggtgtatat
tatgtccaaggaggtaagagtgccgctaaccaccttatgaactggattggcattcagata
gagtttgatcctgatgagatggactgtgcaagaaagcctttcaatgttccagagagcata
cttaggagtgttgattttgatgctttagaaggtgctttgaatatgaagtttaaagacagg
gggcttctggtagaagccattactcatgcgtccagaccatcatcaggagtatcctgttat
cagcggttggaatttgttggtgatgcagttttggaccatcttattaccaggcatttgttt
ttcacttacacaaatttgccaccgggacgattgactgaccttcgggctgctgctgtaaat
aatgaaaattttgctcgtgttgcagttaaacacaatcttcatgtgcatctccgacatggg
tctagtgccttagaaaagcagatcaaagaatttgtcaaggaagttcaggatgaattgtca
aagccgggatttaactcctttggcctgggagactgcaaagctcccaaggtccttggtgac
attgttgaatctattgctggctccatttttcttgatagtggaagggatactactatcgtt
tggaaggtttttcagcctctattgcatcccatggttacaccagagactctgccaatgcat
cctgtgcgtgagctgcaagagcgatgccagcagcaggccgaaggcttagaatacagagca
agtcgtgttggcaatctggccactgttgaagtattcattgatggcgtgcaagttggggcc
gctcaaaatccacaaaagaaaatggctcagaaattagctgccagaaatgccctagctgct
ttgaaagaaaaggaggtggcaaagaatcagaagaatgatgaaaatgggaaaaagaatgga
aaccaaacatttaccagacaaacattaaacgatatttgtttgcgaagaaattggcctatg
ccattctatcgatgtgtgaatgagggcggtccagcacatgcgaagcgtttcacatttgcg
gtgcgcgtcaatactactgatagaggatggacagatgaatgtgttggagagccaatgccc
agtgtcaagaaggccaaagactctgctgctgttcttctcttagaactactaaataaatta
tactcatga
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