Arachis hypogaea (peanut): 112764033
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Entry
112764033 CDS
T07294
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7
KO
K14409
protein SMG7
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112764033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112764033
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
112764033
mRNA cycle factors
Common to processing body (P body) and stress granule
112764033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
DUF6942
Motif
Other DBs
NCBI-GeneID:
112764033
NCBI-ProteinID:
XP_025665336
LinkDB
All DBs
Position
17:complement(5212840..5218844)
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AA seq
979 aa
AA seq
DB search
MIVDTDKMSAPSSRERAQRLYDKNLELESKRRRSAQAQVPSDPNTWPQMRENYEAIILED
HAFAEQHNIEYALWQLHYKRIEELRSYFSAALASGSKSTGKGPARPDRINKIRLQFKAFL
SEASGFYHDLIMKIRAKYGLPLGYFEGSENRVVMEKDAKKSAEMKKGLISCHRCLIYLGD
LARYKGLYGEGDSVKREFAAAASYYLQAASLWPSSGNPHHQLALLASYSGDELAAAYRYF
RSLAVESPFSTARDNLIVAFEKNRQSFSQLYGDVKALAVKDSPGKLTGKGRGKAEGKLAT
RGNDAEACPKKEGTSSIQETYKSFSTCFVRLNGILFTRTSLETFTEVLSLVSTGLCDLLP
TGQEEELNFGTDTLENGLAIVRIVSIIIFTVHNVNKESEGQTYAEIVQRAVLLQNAFTAA
FKLMSFMLERCAQLYDPSRSYLLPGIMVFVEWLACCPDLAAGNDVDENQAIVRSKFWDHC
ISLLNKLLSVGAMCIEDNEEETCFNNMSRYEEGETENRLALSEDFELRGFVPLLPAQTIL
DFSRKLSFGNDGEKERKARVKRIIAAGKALANVVRIDQKMIYFDQKGKKFTVGVEPQISD
DLILPSGSGISGADELLKEDTTDKKVGTVLPDQHQHVEGEDDDEVIVFKPIVAEKRNDLV
AVSSRVPHENSIASGEHIKFHVNSALNSVNHMNHQPSLHASVSGPVPQHLQPVQPHSSRW
LEEVSLANSLKGLRFFENGHVMKPDLALQDSGAFSNHTARSVPIQQAVAPDASVLYGLSK
AQDFVISSKADAIAASAITTDNSVLKTSSALQAGSRKSPVSRPSRHLGPPPGFSQAPVKQ
GIEPVSSDLVNGNPLLDDYSWLDGYQLPSATKGLGANGSLGYPVSNPLQGSNNGLNGIVS
FPFPGKQVPSAQVEKQNGWQDYQTSDLLKAHHDQQLLLQQQQLYLQQQQQQQLASGNQPF
TSLPEQFQGQSIWTGRYFV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgatagtagatacggataaaatgtctgctccttcgtcaagggagcgtgcccaacgcctt
tatgataagaaccttgaattggaaagcaagcggcggagatcagcccaggctcaggtccca
tcagatccaaatacatggccacagatgcgtgagaactatgaagcaataattcttgaggac
catgcttttgctgagcagcacaatattgagtatgcgctatggcagttgcattataagcgg
attgaggaattgaggtcatactttagtgctgctcttgcttctggctcaaaatcaactggg
aaaggtccagcgcgacctgatcggataaataaaattaggctgcaattcaaggctttcctt
tctgaagcatcaggattttaccatgatcttattatgaaaataagagcaaagtatggtctt
cctctagggtactttgagggttcagaaaatcgggttgtgatggagaaagatgcaaagaaa
tctgccgagatgaagaaaggtttaatatcatgtcatcgttgtttgatatacttgggtgat
cttgctcgttacaaaggactgtatggcgaaggtgactcagtgaagcgagagtttgcagca
gctgctagttactatttacaagctgcttctctatggccttcaagtggaaatccccatcat
cagcttgctttattggcttcatattctggggatgagctggcagctgcttatcgatatttt
aggagtctggctgtggagagtccattttcaacagccagagataatttgattgttgcattt
gagaagaatcgtcaaagtttctctcagctttatggagatgtcaaagctcttgcagtcaag
gatagtcctgggaagttgactggaaaaggaagaggaaaagcagaagggaaacttgcaaca
aggggtaatgatgcagaagcttgtcccaaaaaggaaggaacatctagtatacaagagaca
tacaagtccttcagcacttgctttgtccgtctaaatggaatattattcactcgaacaagc
cttgagaccttcaccgaagttctctctcttgttagcactggcctgtgtgatcttctgcca
acagggcaggaggaggagctgaattttggcacagacactcttgagaatggacttgccatc
gtcaggattgtttccattattatatttactgttcataatgtgaataaggaatctgaaggg
caaacttatgctgaaattgtacagcgtgctgttctacttcagaatgcatttactgcagct
tttaaattgatgagtttcatgttagagagatgtgcacagctgtatgatccttctcgtagt
tatcttttacctggcattatggtttttgttgagtggttggcatgctgtcccgatcttgct
gcaggcaatgatgtggacgagaatcaggcaattgttagatcaaaattttgggatcattgt
atatccttgttaaataagcttctttcagttggggctatgtgtattgaagacaatgaagaa
gagacttgctttaataacatgagtaggtatgaagaaggggagactgaaaaccggcttgct
ttgtctgaggactttgagttaagagggtttgtcccacttcttcctgcacaaaccatcttg
gatttttccaggaagctttcctttggaaatgatggtgagaaggaaagaaaagctagggtc
aaaaggattatagctgcaggaaaggctttagcaaatgttgttaggattgatcagaaaatg
atatattttgaccagaagggaaagaaatttacagttggtgttgagccccaaatctcagat
gatcttattctgccctctggttctggcatttctggtgctgatgaattgttgaaggaagat
acaacagacaaaaaggtgggaactgtactgcctgaccaacaccagcatgttgaaggagag
gatgatgatgaagttattgtttttaaacctatagtagccgaaaaacgaaatgatctggta
gctgtgtcatcaagggtgccccatgaaaactcaatagcttctggagagcatattaaattt
catgtgaattctgctttgaactccgtcaatcatatgaaccatcaaccatccttgcatgct
tctgttagtggtccagttccgcaacacctgcaaccagttcagccacattcttcaagatgg
ttagaggaggtttctcttgcaaacagtttaaagggtcttcgattctttgagaatgggcat
gtgatgaaacctgacctggcactgcaagattcaggggcattctctaaccatactgcacgt
tctgtccctatccagcaagctgttgctcccgatgcgagtgtactttatggtctctccaaa
gctcaagactttgttatatcatccaaagcagatgctattgcagcctctgcgattactact
gataactctgttttgaagacatcatcagctctgcaagctggctctagaaaatctccggtt
agcagaccttctaggcatcttggacctccacctggttttagtcaagctcctgttaaacag
ggtattgaacctgttagttcagatttagttaatgggaatccacttttggatgactatagt
tggttggatggatatcagctgccttcggcaaccaaaggtttaggtgccaatggttctctt
ggctaccccgtgtcaaatcctcttcaaggcagtaacaacggcttgaatgggatagttagc
tttcccttccctggcaaacaagttccatctgcacaggtggaaaaacagaatggctggcaa
gactatcagacatctgaccttttgaaagcacaccatgatcagcagctgttactgcaacag
cagcagctttatctgcagcaacagcagcagcagcagctcgcatcaggaaatcagccgttt
acatcattgcctgagcaatttcaaggacagtcaatctggacaggtcgttactttgtgtga
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